RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CMTR1Q8N1G2 835 aaKnown RBP21.97■■□□□ 1.11
COL7A1-207ENST00000467985 C7orf31Q8N865 590 aa21.97■■□□□ 1.11
COL7A1-207ENST00000467985 RETREG2Q8NC44 543 aa21.97■■□□□ 1.11
COL7A1-207ENST00000467985 INPP4AQ96PE3 977 aaPredicted RBP21.97■■□□□ 1.11
COL7A1-207ENST00000467985 MLXIPQ9HAP2 919 aa21.97■■□□□ 1.11
COL7A1-207ENST00000467985 UNC80Q8N2C7 3258 aa21.97■■□□□ 1.11
COL7A1-207ENST00000467985 MEIS2O14770 477 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 ZBTB43O43298 467 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 DNAJB2P25686 324 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 ICAM3P32942 547 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 PSEN2P49810 448 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 MRPS9P82933 396 aaKnown RBP21.96■■□□□ 1.11
COL7A1-207ENST00000467985 SP2Q02086 613 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 ADCK5Q3MIX3 580 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 PCNX4Q63HM2 1172 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 RAB11FIP4Q86YS3 637 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 TEX2Q8IWB9 1127 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 CCDC82Q8N4S0 544 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 SCLYQ96I15 445 aa21.96■■□□□ 1.11
COL7A1-207ENST00000467985 EYSQ5T1H1 3165 aa21.95■■□□□ 1.11
COL7A1-207ENST00000467985 FIBPO43427 364 aa21.95■■□□□ 1.1
COL7A1-207ENST00000467985 REC8O95072 547 aa21.95■■□□□ 1.1
COL7A1-207ENST00000467985 RCAN1P53805 252 aa21.95■■□□□ 1.1
COL7A1-207ENST00000467985 NEDD9Q14511 834 aa21.95■■□□□ 1.1
COL7A1-207ENST00000467985 MFSD10Q14728 455 aa21.95■■□□□ 1.1
COL7A1-207ENST00000467985 HSDL1Q3SXM5 330 aa21.95■■□□□ 1.1
COL7A1-207ENST00000467985 CAGE1Q8TC20 777 aa21.95■■□□□ 1.1
COL7A1-207ENST00000467985 KCNB2Q92953 911 aa21.95■■□□□ 1.1
COL7A1-207ENST00000467985 TTYH1Q9H313 450 aaPredicted RBP21.95■■□□□ 1.1
COL7A1-207ENST00000467985 SPATA31C2B4DYI2 1134 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 ZNF286BP0CG31 522 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 FGD1P98174 961 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 RTN1Q16799 776 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 KIAA0753Q2KHM9 967 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 GDF6Q6KF10 455 aaPredicted RBP21.94■■□□□ 1.1
COL7A1-207ENST00000467985 OTOP2Q7RTS6 562 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 SLC17A8Q8NDX2 589 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 PPP1R13LQ8WUF5 828 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 TCEANC2Q96MN5 208 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 GTF2IRD1Q9UHL9 959 aa21.94■■□□□ 1.1
COL7A1-207ENST00000467985 HAS3O00219 553 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 ACTN1P12814 892 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 HSPA4P34932 840 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 RAB30Q15771 203 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 HEATR3Q7Z4Q2 680 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 NLRX1Q86UT6 975 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 AFAP1L1Q8TED9 768 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 GPKOWQ92917 476 aaPredicted RBP eCLIP21.93■■□□□ 1.1
COL7A1-207ENST00000467985 TIFAQ96CG3 184 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 ZFP91Q96JP5 570 aaPredicted RBP21.93■■□□□ 1.1
COL7A1-207ENST00000467985 CDX2Q99626 313 aaPredicted RBP21.93■■□□□ 1.1
COL7A1-207ENST00000467985 ALG1Q9BT22 464 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 CXXC1Q9P0U4 656 aaPredicted RBP21.93■■□□□ 1.1
COL7A1-207ENST00000467985 HDAC6Q9UBN7 1215 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 BRPF3Q9ULD4 1205 aa21.93■■□□□ 1.1
COL7A1-207ENST00000467985 CNTNAP5Q8WYK1 1306 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 KLF18A0A0U1RQI7 1052 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 hCG_1642624A0A1W2PR95 340 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 SPDYE3A6NKU9 549 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 NOP56O00567 594 aaKnown RBP21.92■■□□□ 1.1
COL7A1-207ENST00000467985 IQCF3P0C7M6 154 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 PPP1R18Q6NYC8 613 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 METTL7BQ6UX53 244 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 GIMAP8Q8ND71 665 aaPredicted RBP21.92■■□□□ 1.1
COL7A1-207ENST00000467985 CDHR1Q96JP9 859 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 SENP7Q9BQF6 1050 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 EHMT1Q9H9B1 1298 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 RTEL1Q9NZ71 1219 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 MSRAQ9UJ68 235 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 SLC4A7Q9Y6M7 1214 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 TANC1Q9C0D5 1861 aa21.92■■□□□ 1.1
COL7A1-207ENST00000467985 GOLGA8AA7E2F4 631 aa21.91■■□□□ 1.1
COL7A1-207ENST00000467985 GOLGA8BA8MQT2 603 aa21.91■■□□□ 1.1
COL7A1-207ENST00000467985 hCG_1984214I3L0E3 225 aa21.91■■□□□ 1.1
COL7A1-207ENST00000467985 SORBS3O60504 671 aa21.91■■□□□ 1.1
COL7A1-207ENST00000467985 PARNO95453 639 aaKnown RBP21.91■■□□□ 1.1
COL7A1-207ENST00000467985 DEFB128Q7Z7B8 93 aa21.91■■□□□ 1.1
COL7A1-207ENST00000467985 ZNF713Q8N859 430 aaPredicted RBP21.91■■□□□ 1.1
COL7A1-207ENST00000467985 USP26Q9BXU7 913 aa21.91■■□□□ 1.1
COL7A1-207ENST00000467985 PBX4Q9BYU1 374 aa21.91■■□□□ 1.1
COL7A1-207ENST00000467985 PRUNE2Q8WUY3 3088 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 CCDC196A0A1B0GTZ2 297 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 ZBBXA8MT70 800 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 GRXCR1A8MXD5 290 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 EPB41L2O43491 1005 aaKnown RBP21.9■■□□□ 1.1
COL7A1-207ENST00000467985 RBL2Q08999 1139 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 FUT2Q10981 343 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 PTK7Q13308 1070 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 BLOC1S2Q6QNY1 142 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 CYFIP1Q7L576 1253 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 GPRASP2Q96D09 838 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 VWCEQ96DN2 955 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 JAKMIP1Q96N16 626 aaKnown RBP21.9■■□□□ 1.1
COL7A1-207ENST00000467985 CTAGE1Q96RT6 745 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 C16orf70Q9BSU1 422 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 GLT8D2Q9H1C3 349 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 ZNF576Q9H609 170 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 CHD7Q9P2D1 2997 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 SNX14Q9Y5W7 946 aa21.9■■□□□ 1.1
COL7A1-207ENST00000467985 TRANK1O15050 2925 aa21.9■■□□□ 1.1
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