RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 ANKRD1Q15327 319 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 PPTC7Q8NI37 304 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 CCDC12Q8WUD4 166 aaPredicted RBP21.39■■□□□ 1.01
YBX1-204ENST00000467957 LARP6Q9BRS8 491 aaKnown RBP21.39■■□□□ 1.01
YBX1-204ENST00000467957 SLC26A6Q9BXS9 759 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 ZMYND12Q9H0C1 365 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 TMEM39AQ9NV64 488 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 RTEL1Q9NZ71 1219 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 SCN10AQ9Y5Y9 1956 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 MYH7BA7E2Y1 1941 aa21.38■■□□□ 1.01
YBX1-204ENST00000467957 HOXD8P13378 290 aaPredicted RBP21.38■■□□□ 1.01
YBX1-204ENST00000467957 CLK2P49760 499 aaKnown RBP21.38■■□□□ 1.01
YBX1-204ENST00000467957 PSMC6P62333 389 aa21.38■■□□□ 1.01
YBX1-204ENST00000467957 MDM2Q00987 491 aaPredicted RBP21.38■■□□□ 1.01
YBX1-204ENST00000467957 SEMA3FQ13275 785 aa21.38■■□□□ 1.01
YBX1-204ENST00000467957 AP3B2Q13367 1082 aa21.38■■□□□ 1.01
YBX1-204ENST00000467957 DGKDQ16760 1214 aa21.38■■□□□ 1.01
YBX1-204ENST00000467957 NLRX1Q86UT6 975 aa21.38■■□□□ 1.01
YBX1-204ENST00000467957 TBX21Q9UL17 535 aa21.38■■□□□ 1.01
YBX1-204ENST00000467957 GGPS1O95749 300 aa21.37■■□□□ 1.01
YBX1-204ENST00000467957 CPLX2Q6PUV4 134 aaKnown RBP21.37■■□□□ 1.01
YBX1-204ENST00000467957 TRIM22Q8IYM9 498 aa21.37■■□□□ 1.01
YBX1-204ENST00000467957 GPRASP2Q96D09 838 aa21.37■■□□□ 1.01
YBX1-204ENST00000467957 UBE2OQ9C0C9 1292 aaKnown RBP21.37■■□□□ 1.01
YBX1-204ENST00000467957 PCDH10Q9P2E7 1040 aa21.37■■□□□ 1.01
YBX1-204ENST00000467957 TPCN1Q9ULQ1 816 aa21.37■■□□□ 1.01
YBX1-204ENST00000467957 UBIAD1Q9Y5Z9 338 aa21.37■■□□□ 1.01
YBX1-204ENST00000467957 CPLX1O14810 134 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 PPFIA4O75335 1185 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 AK2P54819 239 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 SSRP1Q08945 709 aaKnown RBP21.36■■□□□ 1.01
YBX1-204ENST00000467957 NEDD9Q14511 834 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 MCTP2Q6DN12 878 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 NFRKBQ6P4R8 1299 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 CDHR1Q96JP9 859 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 SENP7Q9BQF6 1050 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 C6orf50Q9HD87 102 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 SH3GLB2Q9NR46 395 aa21.36■■□□□ 1.01
YBX1-204ENST00000467957 MAFGO15525 162 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 PFKFB2O60825 505 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 RAG1P15918 1043 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 ITGB5P18084 799 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 ITGB8P26012 769 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 GNA11P29992 359 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 PTPN11Q06124 597 aaPredicted RBP21.35■■□□□ 1.01
YBX1-204ENST00000467957 STK3Q13188 491 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 NBPF20Q3BBV1 942 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 HSDL1Q3SXM5 330 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 METTL7BQ6UX53 244 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 CCDC148Q8NFR7 591 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 KAT2BQ92831 832 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 BADQ92934 168 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 SPATA33Q96N06 139 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 ANO3Q9BYT9 981 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 MLXIPQ9HAP2 919 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 JADE2Q9NQC1 790 aa21.35■■□□□ 1.01
YBX1-204ENST00000467957 RANBP2P49792 3224 aaKnown RBP21.34■■□□□ 1.01
YBX1-204ENST00000467957 B4GALT4O60513 344 aa21.34■■□□□ 1.01
YBX1-204ENST00000467957 PPFIA3O75145 1194 aa21.34■■□□□ 1.01
YBX1-204ENST00000467957 DEXIO95424 95 aa21.34■■□□□ 1.01
YBX1-204ENST00000467957 TIMP1P01033 207 aa21.34■■□□□ 1.01
YBX1-204ENST00000467957 SREBF1P36956 1147 aa21.34■■□□□ 1.01
YBX1-204ENST00000467957 NEK4P51957 841 aa21.34■■□□□ 1.01
YBX1-204ENST00000467957 SCRN1Q12765 414 aa21.34■■□□□ 1.01
YBX1-204ENST00000467957 FAM177A1Q8N128 213 aaPredicted RBP21.34■■□□□ 1.01
YBX1-204ENST00000467957 GIMAP8Q8ND71 665 aaPredicted RBP21.34■■□□□ 1.01
YBX1-204ENST00000467957 SLKQ9H2G2 1235 aaPredicted RBP21.34■■□□□ 1.01
YBX1-204ENST00000467957 TMEM260Q9NX78 707 aa21.34■■□□□ 1.01
YBX1-204ENST00000467957 CDKL5O76039 1030 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 F2P00734 622 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 SUPT20HL2P0C7V6 817 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 SESTD1Q86VW0 696 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 TDHQ8IZJ6 230 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 BICD2Q8TD16 824 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 KATNAL1Q9BW62 490 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 TRPV6Q9H1D0 765 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 BCAS3Q9H6U6 928 aa21.33■■□□□ 1.01
YBX1-204ENST00000467957 TRIOBPQ9H2D6 2365 aa21.32■■□□□ 1
YBX1-204ENST00000467957 KCNA2P16389 499 aa21.32■■□□□ 1
YBX1-204ENST00000467957 MTMR1Q13613 665 aa21.32■■□□□ 1
YBX1-204ENST00000467957 CYFIP1Q7L576 1253 aa21.32■■□□□ 1
YBX1-204ENST00000467957 REXO1Q8N1G1 1221 aaKnown RBP21.32■■□□□ 1
YBX1-204ENST00000467957 PGBD1Q96JS3 809 aa21.32■■□□□ 1
YBX1-204ENST00000467957 MXRA8Q9BRK3 442 aa21.32■■□□□ 1
YBX1-204ENST00000467957 VPS54Q9P1Q0 977 aa21.32■■□□□ 1
YBX1-204ENST00000467957 HAS3O00219 553 aa21.31■■□□□ 1
YBX1-204ENST00000467957 SORBS3O60504 671 aa21.31■■□□□ 1
YBX1-204ENST00000467957 JAKMIP3Q5VZ66 844 aa21.31■■□□□ 1
YBX1-204ENST00000467957 MFSD5Q6N075 450 aa21.31■■□□□ 1
YBX1-204ENST00000467957 CRYGNQ8WXF5 182 aa21.31■■□□□ 1
YBX1-204ENST00000467957 STK36Q9NRP7 1315 aa21.3■■□□□ 1
YBX1-204ENST00000467957 ADAMTS3O15072 1205 aa21.3■■□□□ 1
YBX1-204ENST00000467957 ATP9AO75110 1047 aa21.3■■□□□ 1
YBX1-204ENST00000467957 CYP3A4P08684 503 aa21.3■■□□□ 1
YBX1-204ENST00000467957 PSEN2P49810 448 aa21.3■■□□□ 1
YBX1-204ENST00000467957 FXR1P51114 621 aaKnown RBP eCLIP21.3■■□□□ 1
YBX1-204ENST00000467957 ARHGAP4P98171 946 aa21.3■■□□□ 1
YBX1-204ENST00000467957 CEP55Q53EZ4 464 aa21.3■■□□□ 1
YBX1-204ENST00000467957 FAM47CQ5HY64 1035 aa21.3■■□□□ 1
YBX1-204ENST00000467957 NIPA1Q7RTP0 329 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms