RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 C2orf69Q8N8R5 385 aa7□□□□□ -1.29
GAPVD1-211ENST00000467707 NETO2Q8NC67 525 aa7□□□□□ -1.29
GAPVD1-211ENST00000467707 PRDM7Q9NQW5 492 aa7□□□□□ -1.29
GAPVD1-211ENST00000467707 HOMER2Q9NSB8 354 aa7□□□□□ -1.29
GAPVD1-211ENST00000467707 DDX56Q9NY93 547 aaKnown RBP7□□□□□ -1.29
GAPVD1-211ENST00000467707 APOBEC2Q9Y235 224 aaKnown RBP7□□□□□ -1.29
GAPVD1-211ENST00000467707 RWDD3Q9Y3V2 267 aa7□□□□□ -1.29
GAPVD1-211ENST00000467707 NOTOA8MTQ0 251 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 PNLIPP16233 465 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 BPIP17213 487 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 FPR2P25090 351 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 MECP2P51608 486 aaKnown RBP6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 CYP4F8P98187 520 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 DSG1Q02413 1049 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 EMC4Q5J8M3 183 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 OTOP1Q7RTM1 612 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 NLRX1Q86UT6 975 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 DCP2Q8IU60 420 aaKnown RBP6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 NLGN4XQ8N0W4 816 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 WDR66Q8TBY9 1149 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 MYLIPQ8WY64 445 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 KCNJ15Q99712 375 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 SLC6A20Q9NP91 592 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 MBNL3Q9NUK0 354 aaKnown RBP6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 C19orf73Q9NVV2 129 aa6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 PPARGC1AQ9UBK2 798 aaKnown RBP6.99□□□□□ -1.29
GAPVD1-211ENST00000467707 TRAF5O00463 557 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 SRGAP3O43295 1099 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 PPP1R11O60927 126 aaPredicted RBP6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 RNASE1P07998 156 aaKnown RBP6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 PDE6AP16499 860 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 AFMP43652 599 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 ZNF792Q3KQV3 632 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 BICRALQ6AI39 1079 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 HHIPL2Q6UWX4 724 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 EP400NLQ6ZTU2 488 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 C11orf74Q86VG3 221 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 SMC1BQ8NDV3 1235 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 FLAD1Q8NFF5 587 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 PHOSPHO1Q8TCT1 267 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 SEC14L1Q92503 715 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 CEP89Q96ST8 783 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 PLCD4Q9BRC7 762 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 BOCQ9BWV1 1114 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 JAM3Q9BX67 310 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 AP5M1Q9H0R1 490 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 SP110Q9HB58 689 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 GPR160Q9UJ42 338 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 NUDT5Q9UKK9 219 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 ADAMTS6Q9UKP5 1117 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 CBLCQ9ULV8 474 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 CTNND2Q9UQB3 1225 aa6.98□□□□□ -1.29
GAPVD1-211ENST00000467707 SLC12A8A0AV02 714 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 ZNF561-AS1K7EIQ3 104 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 RAB11FIP3O75154 756 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 GLI4P10075 376 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 LSSP48449 732 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 CDKN1CP49918 316 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 EXOSC10Q01780 885 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 FAPQ12884 760 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 FIGNQ5HY92 759 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 ZMYM1Q5SVZ6 1142 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 STRA8Q7Z7C7 330 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 FERMT3Q86UX7 667 aa6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 SPATS2Q86XZ4 545 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 UHMK1Q8TAS1 419 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-211ENST00000467707 PTPDC1A2A3K4 754 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 HGSO14964 777 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 GPR39O43194 453 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 PSPNO60542 156 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 CYBBP04839 570 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 PDGFRBP09619 1106 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 IL2P60568 153 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 STAT4Q14765 748 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 STEAP3Q658P3 488 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 ARHGAP36Q6ZRI8 547 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 TRIM48Q8IWZ4 208 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 CISD2Q8N5K1 135 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 ABHD4Q8TB40 342 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 PEX11GQ96HA9 241 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 FAM126AQ9BYI3 521 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 PDGFDQ9GZP0 370 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 SMOC1Q9H4F8 434 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 RC3H2Q9HBD1 1191 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 DSEQ9UL01 958 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 ZNF652Q9Y2D9 606 aa6.96□□□□□ -1.3
GAPVD1-211ENST00000467707 H7C1D1 291 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 FKBP9O95302 570 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 NTRK1P04629 796 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 MSL3P1P0C860 447 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 TACR1P25103 407 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 GJA4P35212 333 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 TMEM62Q0P6H9 643 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 NR1I3Q14994 352 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 RGL3Q3MIN7 710 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 PAQR3Q6TCH7 311 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 FKBP9P1Q75LS8 142 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 OSTM1Q86WC4 334 aa6.95□□□□□ -1.3
GAPVD1-211ENST00000467707 EFHBQ8N7U6 833 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms