RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	POLR3E	Q9NVU0	708 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	LAMA3	Q16787	3333 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	SZT2	Q5T011	3432 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	PNMA6F	A0A0J9YX94	578 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663		A6NJR5	290 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	hCG_1984214	I3L0E3	225 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	ARIH2	O95376	493 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	CFB	P00751	764 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	TXN	P10599	105 aa	Known RBP	13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	FDPS	P14324	419 aa	Known RBP	13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	RXRA	P19793	462 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	EPHB4	P54760	987 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	PURA	Q00577	322 aa	Known RBP	13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	TTLL4	Q14679	1199 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	STXBP2	Q15833	593 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	ARHGEF16	Q5VV41	709 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	MFSD5	Q6N075	450 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	ZNF713	Q8N859	430 aa	Predicted RBP	13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	C8orf76	Q96K31	380 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	PXMP2	Q9NR77	195 aa		13.8	□□□□□ -0.2
CTNS-205	ENST00000467663	GOLGA6L22	H0YM25	854 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	KPNA6	O60684	536 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	NR3C2	P08235	984 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	PSMC6	P62333	389 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	FUT2	Q10981	343 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	ATL3	Q6DD88	541 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	HOMER1	Q86YM7	354 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	DEFB123	Q8N688	67 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	FBXO18	Q8NFZ0	1043 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	COPS5	Q92905	334 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	ALG1	Q9BT22	464 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	SLC26A6	Q9BXS9	759 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	SH3GLB2	Q9NR46	395 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	MTMR6	Q9Y217	621 aa		13.79	□□□□□ -0.2
CTNS-205	ENST00000467663	TCHH	Q07283	1943 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	MYH15	Q9Y2K3	1946 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	EIF3J	O75822	258 aa	Known RBP	13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	F13A1	P00488	732 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	MYL3	P08590	195 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	EIF2AK2	P19525	551 aa	Known RBP	13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	SAFB	Q15424	915 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	BRDT	Q58F21	947 aa	Predicted RBP	13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	GALNT17	Q6IS24	598 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	SEPT14	Q6ZU15	432 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	TEX2	Q8IWB9	1127 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	TNPO1	Q92973	898 aa	Known RBP	13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	PDCD2L	Q9BRP1	358 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	MTG1	Q9BT17	334 aa	Predicted RBP	13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	CNTNAP5	Q8WYK1	1306 aa		13.78	□□□□□ -0.2
CTNS-205	ENST00000467663	VPS37C	A5D8V6	355 aa	Predicted RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	B4GALT4	O60513	344 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	GH1	P01241	217 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	POLR2M	P0CAP2	368 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	HOXA13	P31271	388 aa	Predicted RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	SMAD3	P84022	425 aa	Known RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	PPIG	Q13427	754 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	PFKFB3	Q16875	520 aa	Predicted RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	LY6K	Q17RY6	165 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	CSPP1	Q1MSJ5	1256 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663		Q7L0L9	218 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	C16orf59	Q7L2K0	433 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	RAB11FIP4	Q86YS3	637 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	TMEM199	Q8N511	208 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	SRBD1	Q8N5C6	995 aa	Known RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	PHKB	Q93100	1093 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	RRP36	Q96EU6	259 aa	Known RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	RNPC3	Q96LT9	517 aa	Known RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	PPP1R12C	Q9BZL4	782 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	TRPV6	Q9H1D0	765 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	MTMR10	Q9NXD2	777 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	DDX41	Q9UJV9	622 aa	Known RBP	13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	ZDHHC9	Q9Y397	364 aa		13.77	□□□□□ -0.21
CTNS-205	ENST00000467663	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	DDX11L8	A8MPP1	907 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	PLEKHA8P1	O95397	391 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	SCG2	P13521	617 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	CSF2RA	P15509	400 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	ARHGAP1	Q07960	439 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	PGM5	Q15124	567 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	BRAP	Q7Z569	592 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	VSIG10L	Q86VR7	867 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	CCDC148	Q8NFR7	591 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	EMID1	Q96A84	441 aa	Predicted RBP	13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	NOC4L	Q9BVI4	516 aa	Known RBP	13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	HIPK3	Q9H422	1215 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	BRMS1	Q9HCU9	246 aa		13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	SEC63	Q9UGP8	760 aa	Known RBP	13.76	□□□□□ -0.21
CTNS-205	ENST00000467663		V9GY48	417 aa	Predicted RBP	13.76	□□□□□ -0.21
CTNS-205	ENST00000467663	RGS20	O76081	388 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	MMP3	P08254	477 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	SUPT20HL2	P0C7V6	817 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	CYP2C18	P33260	490 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	PTPN11	Q06124	597 aa	Predicted RBP	13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	PKP1	Q13835	747 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	NBPF20	Q3BBV1	942 aa		13.75	□□□□□ -0.21
CTNS-205	ENST00000467663	TMEM240	Q5SV17	173 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms