RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 ZNF654Q8IZM8 581 aa12.69□□□□□ -0.38
PRPF3-203ENST00000467514 LRRC47Q8N1G4 583 aaKnown RBP12.69□□□□□ -0.38
PRPF3-203ENST00000467514 PHOSPHO2Q8TCD6 241 aa12.69□□□□□ -0.38
PRPF3-203ENST00000467514 AGBL1Q96MI9 1066 aa12.69□□□□□ -0.38
PRPF3-203ENST00000467514 C11orf16Q9NQ32 467 aa12.69□□□□□ -0.38
PRPF3-203ENST00000467514 GNEQ9Y223 722 aaKnown RBP12.69□□□□□ -0.38
PRPF3-203ENST00000467514 SLC12A7Q9Y666 1083 aa12.69□□□□□ -0.38
PRPF3-203ENST00000467514 GRIN2DO15399 1336 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 TSPY2A6NKD2 308 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 GOLGA8AA7E2F4 631 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 DDAH1O94760 285 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 ALADP13716 330 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 PTGS1P23219 599 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 ADD1P35611 737 aaKnown RBP12.68□□□□□ -0.38
PRPF3-203ENST00000467514 CPT1AP50416 773 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 STAT2P52630 851 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 LARP1BQ659C4 914 aaKnown RBP12.68□□□□□ -0.38
PRPF3-203ENST00000467514 IQSEC1Q6DN90 963 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 NSMFQ6X4W1 530 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 RAB11FIP4Q86YS3 637 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 ZNF444Q8N0Y2 327 aaPredicted RBP12.68□□□□□ -0.38
PRPF3-203ENST00000467514 GJD3Q8N144 294 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 RGS22Q8NE09 1264 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 MYL10Q9BUA6 226 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 KATNBL1Q9H079 304 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
PRPF3-203ENST00000467514 PDGFCQ9NRA1 345 aa12.68□□□□□ -0.38
PRPF3-203ENST00000467514 GREB1LQ9C091 1923 aaPredicted RBP12.68□□□□□ -0.38
PRPF3-203ENST00000467514 TMEM232C9JQI7 657 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 BAG4O95429 457 aaKnown RBP12.67□□□□□ -0.38
PRPF3-203ENST00000467514 FDX1P10109 184 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 BMP3P12645 472 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 IFNAR1P17181 557 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 KCNA5P22460 613 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 NKX3-2P78367 333 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 FUT2Q10981 343 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 BFSP2Q13515 415 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 IFIT1BQ5T764 474 aaKnown RBP12.67□□□□□ -0.38
PRPF3-203ENST00000467514 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 EP400NLQ6ZTU2 488 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
PRPF3-203ENST00000467514 MICU3Q86XE3 530 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 FAM133AQ8N9E0 248 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 FANCBQ8NB91 859 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 OR6J1Q8NGC5 347 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 UBE2ZQ9H832 354 aaPredicted RBP12.67□□□□□ -0.38
PRPF3-203ENST00000467514 VTA1Q9NP79 307 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 NAP1L2Q9ULW6 460 aaPredicted RBP12.67□□□□□ -0.38
PRPF3-203ENST00000467514 Q9Y3F1 56 aa12.67□□□□□ -0.38
PRPF3-203ENST00000467514 DDX49Q9Y6V7 483 aaKnown RBP12.67□□□□□ -0.38
PRPF3-203ENST00000467514 STK36Q9NRP7 1315 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 TTLL1O95922 423 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 F13A1P00488 732 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 RXRAP19793 462 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 RTN1Q16799 776 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 TKFCQ3LXA3 575 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 SYNE3Q6ZMZ3 975 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 CATIPQ7Z7H3 387 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 CHURC1Q8WUH1 139 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
PRPF3-203ENST00000467514 MTG1Q9BT17 334 aaPredicted RBP12.66□□□□□ -0.38
PRPF3-203ENST00000467514 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 CDKL5O76039 1030 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 ARHGEF15O94989 841 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 TSPY3P0CV98 308 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 TSPY8P0CW00 308 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 CALM1P0DP23 149 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 CALM2P0DP24 149 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 CALM3P0DP25 149 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 SLC1A4P43007 532 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 PPP1R13LQ8WUF5 828 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 CEP95Q96GE4 821 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 GBP4Q96PP9 640 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 CD320Q9NPF0 282 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 ORC3Q9UBD5 711 aaPredicted RBP12.65□□□□□ -0.38
PRPF3-203ENST00000467514 MTMR7Q9Y216 660 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 KIF3AQ9Y496 699 aa12.65□□□□□ -0.38
PRPF3-203ENST00000467514 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 CPLX1O14810 134 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 IQCF3P0C7M6 154 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 PURAQ00577 322 aaKnown RBP12.64□□□□□ -0.39
PRPF3-203ENST00000467514 NHLH1Q02575 133 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 NBPF20Q3BBV1 942 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 DUSP28Q4G0W2 176 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 PTCRAQ6ISU1 281 aaPredicted RBP12.64□□□□□ -0.39
PRPF3-203ENST00000467514 CPLX2Q6PUV4 134 aaKnown RBP12.64□□□□□ -0.39
PRPF3-203ENST00000467514 SPRED2Q7Z698 418 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 FAM178BQ8IXR5 827 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 SNX27Q96L92 541 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 TGS1Q96RS0 853 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms