RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ATF2P15336 505 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 AFF3P51826 1226 aaKnown RBP5.7□□□□□ -1.5
VPS50-209ENST00000467326 GPR85P60893 370 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 KIZQ2M2Z5 673 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 FOXB2Q5VYV0 432 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 STEAP3Q658P3 488 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 ETV3LQ6ZN32 361 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 SCUBE1Q8IWY4 988 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 UBXN4Q92575 508 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 DACT3Q96B18 629 aaPredicted RBP5.7□□□□□ -1.5
VPS50-209ENST00000467326 EXOC2Q96KP1 924 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 DRC1Q96MC2 740 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 PWWP2AQ96N64 755 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 ZCCHC4Q9H5U6 513 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 PARD6AQ9NPB6 346 aa5.7□□□□□ -1.5
VPS50-209ENST00000467326 PPARGC1AQ9UBK2 798 aaKnown RBP5.7□□□□□ -1.5
VPS50-209ENST00000467326 FAM153BP0C7A2 387 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 SYN1P17600 705 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 CACNB2Q08289 660 aaPredicted RBP5.69□□□□□ -1.5
VPS50-209ENST00000467326 BMS1Q14692 1282 aaKnown RBP5.69□□□□□ -1.5
VPS50-209ENST00000467326 LONRF2Q1L5Z9 754 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 EMC4Q5J8M3 183 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 FAM209AQ5JX71 171 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 LBX2Q6XYB7 198 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 MILR1Q7Z6M3 343 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 MIB1Q86YT6 1006 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 NLGN1Q8N2Q7 840 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 SMARCC2Q8TAQ2 1214 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 DNAJC7Q99615 494 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 YIPF4Q9BSR8 244 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 ALG1Q9BT22 464 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 CDIP1Q9H305 208 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 PCDHB4Q9Y5E5 795 aa5.69□□□□□ -1.5
VPS50-209ENST00000467326 KRIT1O00522 736 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 HGSO14964 777 aaPredicted RBP5.68□□□□□ -1.5
VPS50-209ENST00000467326 C8BP07358 591 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 CYP2C8P10632 490 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 FOXO4P98177 505 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 NFE2L2Q16236 605 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 MAMDC2Q7Z304 686 aaPredicted RBP5.68□□□□□ -1.5
VPS50-209ENST00000467326 ZC3H18Q86VM9 953 aaKnown RBP5.68□□□□□ -1.5
VPS50-209ENST00000467326 FAM126BQ8IXS8 530 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 IFNL3Q8IZI9 196 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.68□□□□□ -1.5
VPS50-209ENST00000467326 MRPS23Q9Y3D9 190 aaKnown RBP5.68□□□□□ -1.5
VPS50-209ENST00000467326 TRAF6Q9Y4K3 522 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 PMF1-BGLAPU3KQ54 211 aa5.68□□□□□ -1.5
VPS50-209ENST00000467326 ASXL2Q76L83 1435 aa5.67□□□□□ -1.5
VPS50-209ENST00000467326 AQP7O14520 342 aa5.67□□□□□ -1.5
VPS50-209ENST00000467326 FOXD2O60548 495 aaPredicted RBP5.67□□□□□ -1.5
VPS50-209ENST00000467326 MAFKO60675 156 aa5.67□□□□□ -1.5
VPS50-209ENST00000467326 PLA2G1BP04054 148 aaKnown RBP5.67□□□□□ -1.5
VPS50-209ENST00000467326 C6orf222P0C671 652 aaPredicted RBP5.67□□□□□ -1.5
VPS50-209ENST00000467326 ZC3H12BQ5HYM0 836 aaKnown RBP5.67□□□□□ -1.5
VPS50-209ENST00000467326 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
VPS50-209ENST00000467326 ZSWIM2Q8NEG5 633 aa5.67□□□□□ -1.5
VPS50-209ENST00000467326 THAP3Q8WTV1 239 aaPredicted RBP5.67□□□□□ -1.5
VPS50-209ENST00000467326 PTPRN2Q92932 1015 aa5.67□□□□□ -1.5
VPS50-209ENST00000467326 DDX11Q96FC9 970 aa5.67□□□□□ -1.5
VPS50-209ENST00000467326 JAM3Q9BX67 310 aa5.67□□□□□ -1.5
VPS50-209ENST00000467326 MYOTQ9UBF9 498 aa5.67□□□□□ -1.5
VPS50-209ENST00000467326 CDK11AQ9UQ88 783 aaPredicted RBP5.67□□□□□ -1.5
VPS50-209ENST00000467326 SOD2P04179 222 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 GNAT1P11488 350 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 STAT5AP42229 794 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 GABREP78334 506 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 HTRA3P83110 453 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 C2orf27AQ580R0 203 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 CYP4F22Q6NT55 531 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 PIP4K2CQ8TBX8 421 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 PHOSPHO1Q8TCT1 267 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 FNIP1Q8TF40 1166 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 C20orf173Q96LM9 149 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 DHRS4Q9BTZ2 278 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 PTCH2Q9Y6C5 1203 aa5.66□□□□□ -1.5
VPS50-209ENST00000467326 TCRBV5S2A0A599 114 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 FAM47E-STBD1D6RA91 191 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 CAP1Q01518 475 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 SPIRE1Q08AE8 756 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 VWA3BQ502W6 1294 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 CD300LDQ6UXZ3 194 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 FAM26EQ8N5C1 309 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 JMYQ8N9B5 988 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 LINC01356Q8N9X3 169 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 ARRDC4Q8NCT1 418 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 KISS1RQ969F8 398 aaPredicted RBP5.65□□□□□ -1.5
VPS50-209ENST00000467326 MRFAP1L1Q96HT8 127 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 KCNJ15Q99712 375 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 LNPKQ9C0E8 428 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 ZSWIM4Q9H7M6 989 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 IPPKQ9H8X2 491 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 PCDH18Q9HCL0 1135 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 SLC6A20Q9NP91 592 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 DTLQ9NZJ0 730 aa5.65□□□□□ -1.5
VPS50-209ENST00000467326 TRIM13O60858 407 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 TADA3O75528 432 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 BMP7P18075 431 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 NAT1P18440 290 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 PAK1Q13153 545 aa5.64□□□□□ -1.51
VPS50-209ENST00000467326 NFIXQ14938 502 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms