RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 LEKR1Q6ZMV7 388 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 NEK8Q86SG6 692 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 COG1Q8WTW3 980 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 TSPYL1Q9H0U9 437 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 FEZ2Q9UHY8 353 aaPredicted RBP16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 PLAGL2Q9UPG8 496 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 ZNF185O15231 689 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 PHACTR2O75167 634 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 IVLP07476 585 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 KIF5AQ12840 1032 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 SIK3Q9Y2K2 1263 aa16.36■□□□□ 0.21
PRPF38B-204ENST00000467302 DDTLA6NHG4 134 aaPredicted RBP16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 RNF40O75150 1001 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 TECP42680 631 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 ATP2B2Q01814 1243 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 FKBP15Q5T1M5 1219 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 CCNI2Q6ZMN8 369 aaPredicted RBP16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 ZNF572Q7Z3I7 529 aaPredicted RBP16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 SECISBP2LQ93073 1101 aaKnown RBP16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 CCDC42Q96M95 316 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 DNAJC18Q9H819 358 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 ATRNL1Q5VV63 1379 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 MACROD2A1Z1Q3 448 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 ENTPD3O75355 529 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 LCA5LO95447 670 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 PLEKP08567 350 aaPredicted RBP16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 IDEP14735 1019 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 DPEP1P16444 411 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 ZNF543Q08ER8 600 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 CREG2Q8IUH2 290 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 PCMTD1Q96MG8 357 aaPredicted RBP16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 ARHGAP20Q9P2F6 1191 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 LRWD1Q9UFC0 647 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 LCMT1Q9UIC8 334 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 SNX12Q9UMY4 172 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 JRKLQ9Y4A0 524 aa16.35■□□□□ 0.21
PRPF38B-204ENST00000467302 ESYT2A0FGR8 921 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 SLURP2P0DP57 97 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 MYBL2P10244 700 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 CERKLQ49MI3 558 aaPredicted RBP16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 VWA3BQ502W6 1294 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 RSBN1LQ6PCB5 846 aaPredicted RBP16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 KRT26Q7Z3Y9 468 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 TRIM58Q8NG06 486 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 TBCKQ8TEA7 893 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 MTMR9Q96QG7 549 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 BLOC1S4Q9NUP1 217 aa16.34■□□□□ 0.21
PRPF38B-204ENST00000467302 ABCB11O95342 1321 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 EPHB6O15197 1021 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 ZMYND10O75800 440 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 PRLRP16471 622 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 KCNA3P22001 575 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 TNNT3P45378 269 aaPredicted RBP16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 ITIH3Q06033 890 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 GRB10Q13322 594 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 SPA17Q15506 151 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 GPATCH4Q5T3I0 446 aaKnown RBP16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 IQCEQ6IPM2 695 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 SH3BP5LQ7L8J4 393 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 SRLQ86TD4 932 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 MMGT1Q8N4V1 131 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 CAGE1Q8TC20 777 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 NDST4Q9H3R1 872 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 SH2D4AQ9H788 454 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 SLC39A2Q9NP94 309 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 JADE2Q9NQC1 790 aa16.33■□□□□ 0.21
PRPF38B-204ENST00000467302 PVALEFA0A1B0GWK0 134 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 MYMKA6NI61 221 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 MYO1CO00159 1063 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 TATDN1Q6P1N9 297 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 SV2BQ7L1I2 683 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 LARGE2Q8N3Y3 721 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 CALML4Q96GE6 196 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 IFIH1Q9BYX4 1025 aaKnown RBP16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 PCDHA13Q9Y5I0 950 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 CAPN6Q9Y6Q1 641 aa16.33■□□□□ 0.2
PRPF38B-204ENST00000467302 FAM196BA6NMK8 535 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 AGPSO00116 658 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 USO1O60763 962 aaKnown RBP16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 C2orf54Q08AI8 447 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 CCDC96Q2M329 555 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 PPP1R18Q6NYC8 613 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 LRRC31Q6UY01 552 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 ADGRF4Q8IZF3 695 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 PNMA5Q96PV4 448 aa16.32■□□□□ 0.2
PRPF38B-204ENST00000467302 SELENOOQ9BVL4 669 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms