RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 CYP2C18P33260 490 aa22.35■■□□□ 1.17
GMDS-203ENST00000467288 PPIGQ13427 754 aaKnown RBP eCLIP22.35■■□□□ 1.17
GMDS-203ENST00000467288 DGKDQ16760 1214 aa22.35■■□□□ 1.17
GMDS-203ENST00000467288 GNPTABQ3T906 1256 aa22.35■■□□□ 1.17
GMDS-203ENST00000467288 PCNX4Q63HM2 1172 aa22.35■■□□□ 1.17
GMDS-203ENST00000467288 WWC2Q6AWC2 1192 aa22.35■■□□□ 1.17
GMDS-203ENST00000467288 TMEM199Q8N511 208 aa22.35■■□□□ 1.17
GMDS-203ENST00000467288 KAT2BQ92831 832 aa22.35■■□□□ 1.17
GMDS-203ENST00000467288 GPKOWQ92917 476 aaPredicted RBP eCLIP22.35■■□□□ 1.17
GMDS-203ENST00000467288 TTYH1Q9H313 450 aaPredicted RBP22.35■■□□□ 1.17
GMDS-203ENST00000467288 TRMT13Q9NUP7 481 aaKnown RBP22.35■■□□□ 1.17
GMDS-203ENST00000467288 UMODL1Q5DID0 1318 aa22.34■■□□□ 1.17
GMDS-203ENST00000467288 SPATA31C2B4DYI2 1134 aa22.34■■□□□ 1.17
GMDS-203ENST00000467288 GGPS1O95749 300 aa22.34■■□□□ 1.17
GMDS-203ENST00000467288 CSF2RAP15509 400 aa22.34■■□□□ 1.17
GMDS-203ENST00000467288 ADD1P35611 737 aaKnown RBP22.34■■□□□ 1.17
GMDS-203ENST00000467288 FAM47CQ5HY64 1035 aa22.34■■□□□ 1.17
GMDS-203ENST00000467288 RTEL1Q9NZ71 1219 aa22.34■■□□□ 1.17
GMDS-203ENST00000467288 V9GY48 417 aaPredicted RBP22.34■■□□□ 1.17
GMDS-203ENST00000467288 NID2Q14112 1375 aa22.34■■□□□ 1.17
GMDS-203ENST00000467288 CCDC196A0A1B0GTZ2 297 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 FIBPO43427 364 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 METAP2P50579 478 aaKnown RBP eCLIP22.33■■□□□ 1.17
GMDS-203ENST00000467288 SEMA3FQ13275 785 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 UBE2SQ16763 222 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 HSDL1Q3SXM5 330 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 TYW1BQ6NUM6 668 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 PPP1R18Q6NYC8 613 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 C16orf59Q7L2K0 433 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 SESTD1Q86VW0 696 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 TEX2Q8IWB9 1127 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 PPP1R13LQ8WUF5 828 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 RNPC3Q96LT9 517 aaKnown RBP22.33■■□□□ 1.17
GMDS-203ENST00000467288 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.33■■□□□ 1.177e-12■□□□□ 8.9
GMDS-203ENST00000467288 COL25A1Q9BXS0 654 aaPredicted RBP22.33■■□□□ 1.17
GMDS-203ENST00000467288 ZSWIM6Q9HCJ5 1215 aa22.33■■□□□ 1.17
GMDS-203ENST00000467288 NAP1L2Q9ULW6 460 aaPredicted RBP22.33■■□□□ 1.17
GMDS-203ENST00000467288 MYH7BA7E2Y1 1941 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 hCG_1984214I3L0E3 225 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 PPFIA4O75335 1185 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 CYP2C9P11712 490 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 EVCP57679 992 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 RUFY3Q7L099 469 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 ZNF713Q8N859 430 aaPredicted RBP22.32■■□□□ 1.16
GMDS-203ENST00000467288 SPATA33Q96N06 139 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 WNT8AQ9H1J5 351 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 PCDHA6Q9UN73 950 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 PCDHA8Q9Y5H6 950 aa22.32■■□□□ 1.16
GMDS-203ENST00000467288 STXBP3O00186 592 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 HAS3O00219 553 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 F2P00734 622 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 NAPAP54920 295 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 TMEM240Q5SV17 173 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 MYLIPQ8WY64 445 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 TM6SF1Q9BZW5 370 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 BCAS3Q9H6U6 928 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 MLXIPQ9HAP2 919 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 IL23AQ9NPF7 189 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 RIC8AQ9NPQ8 531 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 BARHL2Q9NY43 387 aa22.31■■□□□ 1.16
GMDS-203ENST00000467288 SPDYE3A6NKU9 549 aa22.3■■□□□ 1.16
GMDS-203ENST00000467288 SORBS3O60504 671 aa22.3■■□□□ 1.16
GMDS-203ENST00000467288 PSEN2P49810 448 aa22.3■■□□□ 1.16
GMDS-203ENST00000467288 CCL23P55773 120 aa22.3■■□□□ 1.16
GMDS-203ENST00000467288 NEDD9Q14511 834 aa22.3■■□□□ 1.16
GMDS-203ENST00000467288 NLRX1Q86UT6 975 aa22.3■■□□□ 1.16
GMDS-203ENST00000467288 MAFAQ8NHW3 353 aaPredicted RBP22.3■■□□□ 1.16
GMDS-203ENST00000467288 KATNAL1Q9BW62 490 aa22.3■■□□□ 1.16
GMDS-203ENST00000467288 ZNF286BP0CG31 522 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 ACRP10323 421 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 CHMP4BP1P59074 171 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 MFSD10Q14728 455 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 PFKFB3Q16875 520 aaPredicted RBP22.29■■□□□ 1.16
GMDS-203ENST00000467288 RASIP1Q5U651 963 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 PSRC1Q6PGN9 363 aaPredicted RBP22.29■■□□□ 1.16
GMDS-203ENST00000467288 METTL7BQ6UX53 244 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 GPRASP2Q96D09 838 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 SENP7Q9BQF6 1050 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 UBIAD1Q9Y5Z9 338 aa22.29■■□□□ 1.16
GMDS-203ENST00000467288 VCANP13611 3396 aa22.28■■□□□ 1.16
GMDS-203ENST00000467288 CDH23Q9H251 3354 aa22.28■■□□□ 1.16
GMDS-203ENST00000467288 PDIA3P30101 505 aaKnown RBP22.28■■□□□ 1.16
GMDS-203ENST00000467288 TOB2Q14106 344 aaPredicted RBP22.28■■□□□ 1.16
GMDS-203ENST00000467288 NTRK3Q16288 839 aa22.28■■□□□ 1.16
GMDS-203ENST00000467288 GDF6Q6KF10 455 aaPredicted RBP22.28■■□□□ 1.16
GMDS-203ENST00000467288 ZNF365Q70YC5 407 aa22.28■■□□□ 1.16
GMDS-203ENST00000467288 CTAGE1Q96RT6 745 aa22.28■■□□□ 1.16
GMDS-203ENST00000467288 C16orf70Q9BSU1 422 aa22.28■■□□□ 1.16
GMDS-203ENST00000467288 GTF2IRD1Q9UHL9 959 aa22.28■■□□□ 1.16
GMDS-203ENST00000467288 CYP46A1Q9Y6A2 500 aa22.28■■□□□ 1.16
GMDS-203ENST00000467288 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.27■■□□□ 1.16
GMDS-203ENST00000467288 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.27■■□□□ 1.16
GMDS-203ENST00000467288 SMCO2A6NFE2 343 aa22.27■■□□□ 1.16
GMDS-203ENST00000467288 PRPF3O43395 683 aaKnown RBP22.27■■□□□ 1.16
GMDS-203ENST00000467288 FOSP01100 380 aaPredicted RBP22.27■■□□□ 1.16
GMDS-203ENST00000467288 SCG2P13521 617 aa22.27■■□□□ 1.16
GMDS-203ENST00000467288 ITGB5P18084 799 aa22.27■■□□□ 1.16
GMDS-203ENST00000467288 ADCY7P51828 1080 aa22.27■■□□□ 1.16
GMDS-203ENST00000467288 PTGISQ16647 500 aa22.27■■□□□ 1.16
GMDS-203ENST00000467288 KIAA0753Q2KHM9 967 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms