RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CCDC174Q6PII3 467 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 MCF2L2Q86YR7 1114 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 KCTD17Q8N5Z5 321 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 RASSF8Q8NHQ8 419 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 ETNPPLQ8TBG4 499 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 ZC3H15Q8WU90 426 aaKnown RBP10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 C7orf25Q9BPX7 421 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 LRRC27Q9C0I9 530 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 HSD3B7Q9H2F3 369 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 TTC12Q9H892 705 aaPredicted RBP10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 PCDHA12Q9UN75 941 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 ZKSCAN5Q9Y2L8 839 aa10.72□□□□□ -0.69
APOBEC1-202ENST00000467171 MARCH6O60337 910 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 USP2O75604 605 aaPredicted RBP10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 RHOBTB3O94955 611 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 ZNF18P17022 549 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 OAZ1P54368 228 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 MTMR2Q13614 643 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 ZNF658Q5TYW1 1059 aaPredicted RBP10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 USP50Q70EL3 339 aaPredicted RBP10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 LAPTM4BQ86VI4 370 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 RBM46Q8TBY0 533 aaKnown RBP10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 LRRC15Q8TF66 581 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 CLEC4DQ8WXI8 215 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 LENG9Q96B70 501 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 DCPSQ96C86 337 aaKnown RBP10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 PNMA5Q96PV4 448 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 TRIM9Q9C026 710 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 CCPG1Q9ULG6 757 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 ADAMTS5Q9UNA0 930 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 KDM3AQ9Y4C1 1321 aa10.71□□□□□ -0.69
APOBEC1-202ENST00000467171 SSC5DA1L4H1 1573 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 MYPNQ86TC9 1320 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 FAM86B1E9PN63 330 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 ATP2A1O14983 1001 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 CBFA2T2O43439 604 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 KLRC4O43908 158 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 ZBED4O75132 1171 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 CFBP00751 764 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 FAM86B2P0C5J1 330 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 HOXA13P31271 388 aaPredicted RBP10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 PPP1R2P41236 205 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 FMR1Q06787 632 aaKnown RBP eCLIP10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 SPIRE1Q08AE8 756 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 DHX8Q14562 1220 aaKnown RBP10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 COBLL1Q53SF7 1204 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 PRAMEF18Q5VWM3 479 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 SPATA1Q5VX52 437 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 SV2BQ7L1I2 683 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 SULF1Q8IWU6 871 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 SNX29Q8TEQ0 813 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 RAD54LQ92698 747 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 ZKSCAN4Q969J2 545 aaPredicted RBP10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 CCDC47Q96A33 483 aaKnown RBP10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 NT5C3AQ9H0P0 336 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 BLZF1Q9H2G9 400 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 RPAP3Q9H6T3 665 aaPredicted RBP10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 BLOC1S4Q9NUP1 217 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 ZHX2Q9Y6X8 837 aa10.7□□□□□ -0.7
APOBEC1-202ENST00000467171 RPTORQ8N122 1335 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 IGLV3-22A0A075B6J6 115 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 PVALEFA0A1B0GWK0 134 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 VWA5AO00534 786 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 PPP1R12BO60237 982 aaPredicted RBP10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 FLOT1O75955 427 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 TAL1P17542 331 aaPredicted RBP10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 CASP1P29466 404 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 FANCCQ00597 558 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 SETQ01105 290 aaPredicted RBP10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 PRR16Q569H4 304 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 HAUS3Q68CZ6 603 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 NIPA1Q7RTP0 329 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 REPS2Q8NFH8 660 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 ERMNQ8TAM6 284 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 TBC1D5Q92609 795 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 LARP4BQ92615 738 aaKnown RBP10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 STAMQ92783 540 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 CDK5RAP3Q96JB5 506 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 MED15Q96RN5 788 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 NUDT12Q9BQG2 462 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 FANCLQ9NW38 375 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 IMPACTQ9P2X3 320 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 RWDD2AQ9UIY3 292 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 NFE2L3Q9Y4A8 694 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 AFG3L2Q9Y4W6 797 aa10.69□□□□□ -0.7
APOBEC1-202ENST00000467171 FRMPD4Q14CM0 1322 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 MEIS1O00470 390 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 MSH4O15457 936 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 ZNF500O60304 480 aaPredicted RBP10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 GRIN3BO60391 1043 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 BCRP11274 1271 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 MSNP26038 577 aaKnown RBP10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 CLCN1P35523 988 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 ZNF76P36508 570 aa10.68□□□□□ -0.7
APOBEC1-202ENST00000467171 COG2Q14746 738 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms