RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 BTG4Q9NY30 223 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 PPARGC1AQ9UBK2 798 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 FBXL7Q9UJT9 491 aa6.02□□□□□ -1.45
CDC42BPA-211ENST00000466538 A0A1W2PQJ5 194 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 KRIT1O00522 736 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 MAFKO60675 156 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 USP2O75604 605 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 GNAT1P11488 350 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 PDE6AP16499 860 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 HK2P52789 917 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 MVKQ03426 396 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 STAT4Q14765 748 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 CHRNA2Q15822 529 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 PLEKHG6Q3KR16 790 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 CYP4F22Q6NT55 531 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 KCNJ15Q99712 375 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 PUS7LQ9H0K6 701 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 SLC6A20Q9NP91 592 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 IMPACTQ9P2X3 320 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 CBLCQ9ULV8 474 aa6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 APOBEC2Q9Y235 224 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-211ENST00000466538 PTPDC1A2A3K4 754 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 NOTOA8MTQ0 251 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 NEMP1O14524 444 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 FKBP9O95302 570 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 RAC2P15153 192 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 ITGB7P26010 798 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 LSSP48449 732 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 GUCY2FP51841 1108 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 EVA1CP58658 441 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 HHIPL2Q6UWX4 724 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 FKBP9P1Q75LS8 142 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 CABP7Q86V35 215 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 C11orf74Q86VG3 221 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 OSTM1Q86WC4 334 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 SPATS2Q86XZ4 545 aaKnown RBP6□□□□□ -1.45
CDC42BPA-211ENST00000466538 NLGN4XQ8N0W4 816 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 NXPE1Q8N323 547 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 NUP43Q8NFH3 380 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6□□□□□ -1.45
CDC42BPA-211ENST00000466538 SP110Q9HB58 689 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 CRTAC1Q9NQ79 661 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 SLC5A4Q9NY91 659 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 RWDD3Q9Y3V2 267 aa6□□□□□ -1.45
CDC42BPA-211ENST00000466538 SLC12A8A0AV02 714 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 ZNF561-AS1K7EIQ3 104 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 PNLIPP16233 465 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 PRKCAP17252 672 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 FPR2P25090 351 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 ARL4AP40617 200 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 SLC6A11P48066 632 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 IL2P60568 153 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 CYP4F8P98187 520 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 BRDTQ58F21 947 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 EMC4Q5J8M3 183 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 NFXL1Q6ZNB6 911 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 ARHGAP36Q6ZRI8 547 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 EP400NLQ6ZTU2 488 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 NETO2Q8NC67 525 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 BOCQ9BWV1 1114 aa5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 PDGFDQ9GZP0 370 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-211ENST00000466538 ZNF891A8MT65 544 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 HGSO14964 777 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 ULK1O75385 1050 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 S100BP04271 92 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 AMY2AP04746 511 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 ATP2A2P16615 1042 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 AMY2BP19961 511 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 ADCYAP1R1P41586 468 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 KPNA1P52294 538 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 JAM2P57087 298 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 PLCL1Q15111 1095 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 NLRX1Q86UT6 975 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 PASD1Q8IV76 773 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 TP53INP2Q8IXH6 220 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 EFHBQ8N7U6 833 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 UHMK1Q8TAS1 419 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 PHOSPHO1Q8TCT1 267 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 MYLIPQ8WY64 445 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 PLCD4Q9BRC7 762 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 SMOC1Q9H4F8 434 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 SMURF1Q9HCE7 757 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 PRDM7Q9NQW5 492 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 MBNL3Q9NUK0 354 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 C19orf73Q9NVV2 129 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 DSEQ9UL01 958 aa5.98□□□□□ -1.45
CDC42BPA-211ENST00000466538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 TCRBV5S4A2TA0A5A2 114 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 PSPNO60542 156 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 CLASP2O75122 1294 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 TADA3O75528 432 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 NTRK1P04629 796 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 MSL3P1P0C860 447 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 ZBTB48P10074 688 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 GLI4P10075 376 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 COL6A2P12110 1019 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 SKOR2Q2VWA4 1001 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 RGL3Q3MIN7 710 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 ATP13A4Q4VNC1 1196 aa5.97□□□□□ -1.45
CDC42BPA-211ENST00000466538 STEAP3Q658P3 488 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms