RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 CCDC81Q6ZN84 652 aa9.82□□□□□ -0.84
LSG1-206ENST00000466391 CCDC191Q8NCU4 936 aa9.82□□□□□ -0.84
LSG1-206ENST00000466391 ALDH8A1Q9H2A2 487 aaPredicted RBP9.82□□□□□ -0.84
LSG1-206ENST00000466391 LMBRD1Q9NUN5 540 aa9.82□□□□□ -0.84
LSG1-206ENST00000466391 GMIPQ9P107 970 aa9.82□□□□□ -0.84
LSG1-206ENST00000466391 CCDC171Q6TFL3 1326 aa9.82□□□□□ -0.84
LSG1-206ENST00000466391 RPAP1Q9BWH6 1393 aaPredicted RBP9.81□□□□□ -0.84
LSG1-206ENST00000466391 TGFB1P01137 390 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 SOX9P48436 509 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 ZNF445P59923 1031 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 NECTIN1Q15223 517 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 ARSHQ5FYA8 562 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 VPS53Q5VIR6 699 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 OVOS1Q6IE37 1185 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 LETMD1Q6P1Q0 360 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 VPS37DQ86XT2 251 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 SLFN12Q8IYM2 578 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 RIN3Q8TB24 985 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 MAP4K1Q92918 833 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 TEX13AQ9BXU3 409 aaPredicted RBP9.81□□□□□ -0.84
LSG1-206ENST00000466391 LRRC4CQ9HCJ2 640 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 ZNRF3Q9ULT6 936 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 LEMD3Q9Y2U8 911 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 ITGB4P16144 1822 aa9.81□□□□□ -0.84
LSG1-206ENST00000466391 CICQ96RK0 1608 aaPredicted RBP9.81□□□□□ -0.84
LSG1-206ENST00000466391 A0A087WZG4 1122 aa9.8□□□□□ -0.84
LSG1-206ENST00000466391 PRR19A6NJB7 356 aa9.8□□□□□ -0.84
LSG1-206ENST00000466391 XRCC6P12956 609 aaKnown RBP eCLIP9.8□□□□□ -0.84
LSG1-206ENST00000466391 ATF4P18848 351 aaPredicted RBP9.8□□□□□ -0.84
LSG1-206ENST00000466391 TNNI3KQ59H18 835 aa9.8□□□□□ -0.84
LSG1-206ENST00000466391 CWC27Q6UX04 472 aaKnown RBP9.8□□□□□ -0.84
LSG1-206ENST00000466391 PHACTR4Q8IZ21 702 aa9.8□□□□□ -0.84
LSG1-206ENST00000466391 ZSCAN31Q96LW9 406 aaPredicted RBP9.8□□□□□ -0.84
LSG1-206ENST00000466391 CWC25Q9NXE8 425 aaPredicted RBP9.8□□□□□ -0.84
LSG1-206ENST00000466391 HMG20BQ9P0W2 317 aa9.8□□□□□ -0.84
LSG1-206ENST00000466391 PIM2Q9P1W9 311 aa9.8□□□□□ -0.84
LSG1-206ENST00000466391 TPX2Q9ULW0 747 aaKnown RBP9.8□□□□□ -0.84
LSG1-206ENST00000466391 LIMCH1Q9UPQ0 1083 aa9.8□□□□□ -0.84
LSG1-206ENST00000466391 FPGT-TNNI3KV9GXZ4 949 aa9.8□□□□□ -0.84
LSG1-206ENST00000466391 COL16A1Q07092 1604 aaPredicted RBP9.79□□□□□ -0.84
LSG1-206ENST00000466391 PALLDQ8WX93 1383 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 ANKRD36CQ5JPF3 1778 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 CIAO1O76071 339 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 MAP4K4O95819 1239 aaPredicted RBP9.79□□□□□ -0.84
LSG1-206ENST00000466391 EOMESO95936 686 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 IMPDH2P12268 514 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 FOXO4P98177 505 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 PKP1Q13835 747 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 LRRFIP1Q32MZ4 808 aaKnown RBP9.79□□□□□ -0.84
LSG1-206ENST00000466391 UBE3BQ7Z3V4 1068 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 CDH24Q86UP0 819 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.79□□□□□ -0.84
LSG1-206ENST00000466391 CYB5D2Q8WUJ1 264 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 TMEM40Q8WWA1 233 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 ISCA1Q9BUE6 129 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 PLA2G12BQ9BX93 195 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 GRPEL1Q9HAV7 217 aa9.79□□□□□ -0.84
LSG1-206ENST00000466391 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.79□□□□□ -0.84
LSG1-206ENST00000466391 WDR33Q9C0J8 1336 aaKnown RBP9.79□□□□□ -0.84
LSG1-206ENST00000466391 CYP26A1O43174 497 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 MBD3O95983 291 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 RAG1P15918 1043 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 ZKSCAN1P17029 563 aaPredicted RBP9.78□□□□□ -0.84
LSG1-206ENST00000466391 PSMA5P28066 241 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 PTH1RQ03431 593 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 NMIQ13287 307 aaPredicted RBP9.78□□□□□ -0.84
LSG1-206ENST00000466391 CPSF6Q16630 551 aaKnown RBP eCLIP9.78□□□□□ -0.84
LSG1-206ENST00000466391 NAALADL2Q58DX5 795 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 MCTP1Q6DN14 999 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 FAM43AQ8N2R8 423 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 CPLX3Q8WVH0 158 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 ATG4CQ96DT6 458 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 CCDC74BQ96LY2 380 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 HAUS7Q99871 368 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 UPF3BQ9BZI7 483 aaKnown RBP9.78□□□□□ -0.84
LSG1-206ENST00000466391 CCDC8Q9H0W5 538 aaPredicted RBP9.78□□□□□ -0.84
LSG1-206ENST00000466391 DBNLQ9UJU6 430 aaKnown RBP9.78□□□□□ -0.84
LSG1-206ENST00000466391 DDX49Q9Y6V7 483 aaKnown RBP9.78□□□□□ -0.84
LSG1-206ENST00000466391 ZNF609O15014 1411 aa9.78□□□□□ -0.84
LSG1-206ENST00000466391 ABCC12Q96J65 1359 aa9.77□□□□□ -0.84
LSG1-206ENST00000466391 DNAJA1P31689 397 aaKnown RBP9.77□□□□□ -0.85
LSG1-206ENST00000466391 IL15P40933 162 aaPredicted RBP9.77□□□□□ -0.85
LSG1-206ENST00000466391 AK2P54819 239 aa9.77□□□□□ -0.85
LSG1-206ENST00000466391 CREB3L3Q68CJ9 461 aa9.77□□□□□ -0.85
LSG1-206ENST00000466391 TTLL7Q6ZT98 887 aa9.77□□□□□ -0.85
LSG1-206ENST00000466391 RUFY3Q7L099 469 aa9.77□□□□□ -0.85
LSG1-206ENST00000466391 NLRC3Q7RTR2 1065 aa9.77□□□□□ -0.85
LSG1-206ENST00000466391 BAHD1Q8TBE0 780 aaPredicted RBP9.77□□□□□ -0.85
LSG1-206ENST00000466391 HEXIM2Q96MH2 286 aaKnown RBP9.77□□□□□ -0.85
LSG1-206ENST00000466391 FSD1Q9BTV5 496 aa9.77□□□□□ -0.85
LSG1-206ENST00000466391 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.85
LSG1-206ENST00000466391 RBM8AQ9Y5S9 174 aaKnown RBP9.77□□□□□ -0.85
LSG1-206ENST00000466391 CYP46A1Q9Y6A2 500 aa9.77□□□□□ -0.85
LSG1-206ENST00000466391 SH3TC1Q8TE82 1336 aa9.77□□□□□ -0.85
LSG1-206ENST00000466391 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.76□□□□□ -0.85
LSG1-206ENST00000466391 BCL9O00512 1426 aa9.76□□□□□ -0.85
LSG1-206ENST00000466391 A0A0D9SFI3 127 aa9.76□□□□□ -0.85
LSG1-206ENST00000466391 MEIS3P2A8K0S8 358 aa9.76□□□□□ -0.85
LSG1-206ENST00000466391 SLC27A2O14975 620 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms