RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 BARHL2Q9NY43 387 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 VPS54Q9P1Q0 977 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 PCDHA6Q9UN73 950 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 Q9Y3F1 56 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 PCDHA8Q9Y5H6 950 aa11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 TRIP12Q14669 1992 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-205ENST00000466260 FRMPD4Q14CM0 1322 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 DCDC2CA8MYV0 355 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 ARVCFO00192 962 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 PIK3CDO00329 1044 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 EIF5BO60841 1220 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 RGS20O76081 388 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 MMP3P08254 477 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 CLTBP09497 229 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 ANAPC15P60006 121 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 ARHGAP1Q07960 439 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 SNX17Q15036 470 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 NTRK3Q16288 839 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 GNPTABQ3T906 1256 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 VSIG10LQ86VR7 867 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 RASGRP4Q8TDF6 673 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 LBHD1Q9BQE6 289 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 RNF26Q9BY78 433 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 PPP1R12CQ9BZL4 782 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 TMEM39AQ9NV64 488 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 POLR3EQ9NVU0 708 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 DDX41Q9UJV9 622 aaKnown RBP11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 SCN5AQ14524 2016 aa11.16□□□□□ -0.62
RTFDC1-205ENST00000466260 ELP1O95163 1332 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 MROH7Q68CQ1 1323 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 KAT6AQ92794 2004 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 hCG_1984214I3L0E3 225 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 ADAMTS3O15072 1205 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 TLR3O15455 904 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 LARGE1O95461 756 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 ZNF286BP0CG31 522 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 RAG1P15918 1043 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 IFNAR1P17181 557 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 NEK4P51957 841 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 PURAQ00577 322 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 SCRN1Q12765 414 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 PKN1Q16512 942 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 CPLX2Q6PUV4 134 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 TRIM22Q8IYM9 498 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 FBXL16Q8N461 479 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 ZNF713Q8N859 430 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 ALG1Q9BT22 464 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 ANO3Q9BYT9 981 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 UBE2OQ9C0C9 1292 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 EHMT1Q9H9B1 1298 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 MLXIPQ9HAP2 919 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 RIC8AQ9NPQ8 531 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 DAXXQ9UER7 740 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 TPCN1Q9ULQ1 816 aa11.15□□□□□ -0.62
RTFDC1-205ENST00000466260 TANC1Q9C0D5 1861 aa11.15□□□□□ -0.63
RTFDC1-205ENST00000466260 CEP290O15078 2479 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 TRIM43BA6NCK2 446 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 FIBPO43427 364 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 CABYRO75952 493 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 FOSBP53539 338 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 EVCP57679 992 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 NLRP5P59047 1200 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 NKX3-2P78367 333 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 SP2Q02086 613 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 FAAP100Q0VG06 881 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 SEMA3FQ13275 785 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 HABP4Q5JVS0 413 aaKnown RBP11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 NLRX1Q86UT6 975 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 FAM126BQ8IXS8 530 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 NECAB1Q8N987 351 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 CCDC148Q8NFR7 591 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 BADQ92934 168 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 TRIM43Q96BQ3 446 aaPredicted RBP11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 AIFM3Q96NN9 605 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 UIMC1Q96RL1 719 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 GDF15Q99988 308 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 C6orf50Q9HD87 102 aa11.14□□□□□ -0.63
RTFDC1-205ENST00000466260 WDR81Q562E7 1941 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 GRIN2DO15399 1336 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 A6NJR5 290 aa11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-205ENST00000466260 B4GALT4O60513 344 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms