RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 CRYMQ14894 314 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 FIGNQ5HY92 759 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 HGSNATQ68CP4 663 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 DPH5Q9H2P9 285 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 PLCB1Q9NQ66 1216 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 USP17L12C9JPN9 530 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 USP17L21D6R901 530 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 TRAPPC10P48553 1259 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 DRP2Q13474 957 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 STAG2Q8N3U4 1231 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 USP38Q8NB14 1042 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 AMACRQ9UHK6 382 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 DISP2A7MBM2 1401 aa15.32■□□□□ 0.04
TGFBR3-204ENST00000465892 A0A087X0T9 212 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 TLR2O60603 784 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 LCA5LO95447 670 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 FAM228BP0C875 321 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 RCAN1P53805 252 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 POLR2FP61218 127 aaKnown RBP15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 PPP2R5BQ15173 497 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 PFKFB3Q16875 520 aaPredicted RBP15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 ASTE1Q2TB18 679 aaPredicted RBP15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 TLDC1Q6P9B6 456 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 CCT6BQ92526 530 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 INPP4AQ96PE3 977 aaPredicted RBP15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 PLA2G12BQ9BX93 195 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 CELF4Q9BZC1 486 aaKnown RBP15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 CPVLQ9H3G5 476 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 PPP1R12AO14974 1030 aaPredicted RBP15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 FGFR2P21802 821 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 TNNC1P63316 161 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 LETM2Q2VYF4 491 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 CCDC47Q96A33 483 aaKnown RBP15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 KIF1AQ12756 1690 aa15.31■□□□□ 0.04
TGFBR3-204ENST00000465892 TLDC2A0PJX2 215 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 F8W031 263 aaPredicted RBP15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 HGSO14964 777 aaPredicted RBP15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 PJA2O43164 708 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 UPP2O95045 317 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 ITGA4P13612 1032 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 GCKP35557 465 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 PDXDC1Q6P996 788 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 TATDN2Q93075 761 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 SPDL1Q96EA4 605 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 ISCUQ9H1K1 167 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 PNMA2Q9UL42 364 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 PNPLA7Q6ZV29 1317 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 TMCO5BA8MYB1 307 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 SART1O43290 800 aaKnown RBP15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 RTN2O75298 545 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 IFFO1Q0D2I5 559 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 KCNMA1Q12791 1236 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 XRCC4Q13426 336 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 RAPGEF1Q13905 1077 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 SLC9C1Q4G0N8 1177 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 MEI1Q5TIA1 1274 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 HEATR3Q7Z4Q2 680 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 TAF4BQ92750 862 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 ATP6V0A4Q9HBG4 840 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 TCP11L1Q9NUJ3 509 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 GGA2Q9UJY4 613 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 GRID2IPA4D2P6 1211 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 MGRN1O60291 552 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 SLC8A1P32418 973 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 DHX9Q08211 1270 aaKnown RBP15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 ADAT2Q7Z6V5 191 aaKnown RBP15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 CCDC50Q8IVM0 306 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 FAM133AQ8N9E0 248 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 UHMK1Q8TAS1 419 aaKnown RBP15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 SELENOSQ9BQE4 189 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
TGFBR3-204ENST00000465892 PARP4Q9UKK3 1724 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 CCNT1O60563 726 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 TRIM37O94972 964 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 MAN2A1Q16706 1144 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 CCDC84Q86UT8 332 aaPredicted RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 ZCRB1Q8TBF4 217 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 CUL5Q93034 780 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 RSRC1Q96IZ7 334 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 NLRP3Q96P20 1036 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 MTFR1LQ9H019 292 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 NUP188Q5SRE5 1749 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 EME2A4GXA9 379 aaPredicted RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 ANP32DO95626 131 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 CYP2D6P10635 497 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 BIRC2Q13490 618 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 NAB2Q15742 525 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 GIGYF2Q6Y7W6 1299 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 FMNL3Q8IVF7 1028 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 UIMC1Q96RL1 719 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 KIF9Q9HAQ2 790 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 GOPCQ9HD26 462 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
TGFBR3-204ENST00000465892 PHRF1Q9P1Y6 1649 aaKnown RBP15.28■□□□□ 0.04
TGFBR3-204ENST00000465892 DRD4P21917 467 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms