RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 BCL6P41182 706 aa7.18□□□□□ -1.26
UBR4-209ENST00000465036 PKN3Q6P5Z2 889 aa7.18□□□□□ -1.26
UBR4-209ENST00000465036 TOE1Q96GM8 510 aaKnown RBP7.18□□□□□ -1.26
UBR4-209ENST00000465036 YTHDC1Q96MU7 727 aaKnown RBP7.18□□□□□ -1.26
UBR4-209ENST00000465036 WRNIP1Q96S55 665 aa7.18□□□□□ -1.26
UBR4-209ENST00000465036 COA3Q9Y2R0 106 aaPredicted RBP7.18□□□□□ -1.26
UBR4-209ENST00000465036 CC2D2AQ9P2K1 1620 aa7.18□□□□□ -1.26
UBR4-209ENST00000465036 ZNF536O15090 1300 aa7.18□□□□□ -1.26
UBR4-209ENST00000465036 STAT5AP42229 794 aa7.17□□□□□ -1.26
UBR4-209ENST00000465036 STK32CQ86UX6 486 aa7.17□□□□□ -1.26
UBR4-209ENST00000465036 MBD6Q96DN6 1003 aa7.17□□□□□ -1.26
UBR4-209ENST00000465036 YIPF4Q9BSR8 244 aa7.17□□□□□ -1.26
UBR4-209ENST00000465036 DTLQ9NZJ0 730 aa7.17□□□□□ -1.26
UBR4-209ENST00000465036 TMEFF2Q9UIK5 374 aaPredicted RBP7.17□□□□□ -1.26
UBR4-209ENST00000465036 TSC22D4Q9Y3Q8 395 aa7.17□□□□□ -1.26
UBR4-209ENST00000465036 ITGAVP06756 1048 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 LTBRP36941 435 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 LSAMPQ13449 338 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 PRAMEF18Q5VWM3 479 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 ZNF227Q86WZ6 799 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 RCBTB1Q8NDN9 531 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 BTN2A2Q8WVV5 523 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 CLIC6Q96NY7 704 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 PPP4R1LQ9P1A2 415 aa7.16□□□□□ -1.26
UBR4-209ENST00000465036 TCRBV5S2A0A599 114 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 CAPNS1P04632 268 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 IL13P35225 146 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 EPHB4P54760 987 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 DNERQ8NFT8 737 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 PHOSPHO1Q8TCT1 267 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 PPP1R14AQ96A00 147 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 TMEM209Q96SK2 561 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 TMEM168Q9H0V1 697 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 SRRDQ9UH36 339 aa7.15□□□□□ -1.26
UBR4-209ENST00000465036 CYP1A1P04798 512 aaPredicted RBP7.14□□□□□ -1.27
UBR4-209ENST00000465036 SNRPB2P08579 225 aaKnown RBP7.14□□□□□ -1.27
UBR4-209ENST00000465036 ATF4P18848 351 aaPredicted RBP7.14□□□□□ -1.27
UBR4-209ENST00000465036 TNNI3KQ59H18 835 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 CYP4F22Q6NT55 531 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 TEPPQ6URK8 271 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 LIMS2Q7Z4I7 341 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 ARRDC4Q8NCT1 418 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 CDK5RAP1Q96SZ6 601 aaKnown RBP7.14□□□□□ -1.27
UBR4-209ENST00000465036 LGR4Q9BXB1 951 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 CECR2Q9BXF3 1484 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 L2HGDHQ9H9P8 463 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 CD248Q9HCU0 757 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 INPP5FQ9Y2H2 1132 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 PCDHB4Q9Y5E5 795 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 NPFFR2Q9Y5X5 522 aa7.14□□□□□ -1.27
UBR4-209ENST00000465036 TBX1O43435 398 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 GFRA1P56159 465 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 CDSNQ15517 529 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 STEAP3Q658P3 488 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 C6orf15Q6UXA7 325 aaPredicted RBP7.13□□□□□ -1.27
UBR4-209ENST00000465036 FAM178BQ8IXR5 827 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 SLC16A11Q8NCK7 471 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.13□□□□□ -1.27
UBR4-209ENST00000465036 KISS1RQ969F8 398 aaPredicted RBP7.13□□□□□ -1.27
UBR4-209ENST00000465036 ACBD3Q9H3P7 528 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 EPB41L1Q9H4G0 881 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 FBXL7Q9UJT9 491 aa7.13□□□□□ -1.27
UBR4-209ENST00000465036 SUSD5O60279 629 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 LRG1P02750 347 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 ECI1P42126 302 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 MLLT6P55198 1093 aaPredicted RBP7.12□□□□□ -1.27
UBR4-209ENST00000465036 PPP2CBP62714 309 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 PPP2CAP67775 309 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 SV2CQ496J9 727 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 PPIL6Q8IXY8 311 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 KLHL36Q8N4N3 616 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 C1orf159Q96HA4 380 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 SORCS2Q96PQ0 1159 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 SMOC1Q9H4F8 434 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 ACTR10Q9NZ32 417 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 LRP2BPQ9P2M1 347 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 ST6GALNAC2Q9UJ37 374 aa7.12□□□□□ -1.27
UBR4-209ENST00000465036 NPEPPSL1A6NEC2 478 aa7.11□□□□□ -1.27
UBR4-209ENST00000465036 SMAD7O15105 426 aaKnown RBP7.11□□□□□ -1.27
UBR4-209ENST00000465036 MAFKO60675 156 aa7.11□□□□□ -1.27
UBR4-209ENST00000465036 DGKIO75912 1065 aa7.11□□□□□ -1.27
UBR4-209ENST00000465036 SLC35F1Q5T1Q4 408 aa7.11□□□□□ -1.27
UBR4-209ENST00000465036 DENND5AQ6IQ26 1287 aa7.11□□□□□ -1.27
UBR4-209ENST00000465036 TTLL11Q8NHH1 800 aa7.11□□□□□ -1.27
UBR4-209ENST00000465036 ZCCHC14Q8WYQ9 949 aaKnown RBP7.11□□□□□ -1.27
UBR4-209ENST00000465036 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
UBR4-209ENST00000465036 PDGFDQ9GZP0 370 aaPredicted RBP7.11□□□□□ -1.27
UBR4-209ENST00000465036 EPN3Q9H201 632 aa7.11□□□□□ -1.27
UBR4-209ENST00000465036 PCDHA2Q9Y5H9 948 aa7.11□□□□□ -1.27
UBR4-209ENST00000465036 GPR42O15529 346 aa7.1□□□□□ -1.27
UBR4-209ENST00000465036 CHGBP05060 677 aa7.1□□□□□ -1.27
UBR4-209ENST00000465036 TACR2P21452 398 aa7.1□□□□□ -1.27
UBR4-209ENST00000465036 ICAM4Q14773 271 aa7.1□□□□□ -1.27
UBR4-209ENST00000465036 SF1Q15637 639 aaKnown RBP7.1□□□□□ -1.27
UBR4-209ENST00000465036 SLFN13Q68D06 897 aa7.1□□□□□ -1.27
UBR4-209ENST00000465036 CRIP3Q6Q6R5 217 aa7.1□□□□□ -1.27
UBR4-209ENST00000465036 ARHGEF18Q6ZSZ5 1173 aa7.1□□□□□ -1.27
UBR4-209ENST00000465036 CIR1Q86X95 450 aaPredicted RBP7.1□□□□□ -1.27
UBR4-209ENST00000465036 TRIM48Q8IWZ4 208 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms