RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CNTN2Q02246 1040 aa11.28□□□□□ -0.6
APP-213ENST00000464867 SMAD4Q13485 552 aaKnown RBP11.28□□□□□ -0.6
APP-213ENST00000464867 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
APP-213ENST00000464867 EPC2Q52LR7 807 aa11.28□□□□□ -0.6
APP-213ENST00000464867 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
APP-213ENST00000464867 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
APP-213ENST00000464867 DGLUCYQ7Z3D6 616 aa11.28□□□□□ -0.6
APP-213ENST00000464867 CRIPAKQ8N1N5 446 aa11.28□□□□□ -0.6
APP-213ENST00000464867 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
APP-213ENST00000464867 RAD50Q92878 1312 aa11.28□□□□□ -0.6
APP-213ENST00000464867 MYO7AQ13402 2215 aa11.28□□□□□ -0.6
APP-213ENST00000464867 J3QL48 77 aa11.27□□□□□ -0.61
APP-213ENST00000464867 KPNA6O60684 536 aa11.27□□□□□ -0.61
APP-213ENST00000464867 SELPP16109 830 aa11.27□□□□□ -0.61
APP-213ENST00000464867 NBL1P41271 181 aa11.27□□□□□ -0.61
APP-213ENST00000464867 PTGISQ16647 500 aa11.27□□□□□ -0.61
APP-213ENST00000464867 EEPD1Q7L9B9 569 aa11.27□□□□□ -0.61
APP-213ENST00000464867 ADSSL1Q8N142 457 aa11.27□□□□□ -0.61
APP-213ENST00000464867 SNIP1Q8TAD8 396 aaKnown RBP11.27□□□□□ -0.61
APP-213ENST00000464867 SSH1Q8WYL5 1049 aa11.27□□□□□ -0.61
APP-213ENST00000464867 KIFC2Q96AC6 838 aa11.27□□□□□ -0.61
APP-213ENST00000464867 DBNDD2Q9BQY9 259 aa11.27□□□□□ -0.61
APP-213ENST00000464867 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
APP-213ENST00000464867 PDGFCQ9NRA1 345 aa11.27□□□□□ -0.61
APP-213ENST00000464867 HOMER2Q9NSB8 354 aa11.27□□□□□ -0.61
APP-213ENST00000464867 CD207Q9UJ71 328 aa11.27□□□□□ -0.61
APP-213ENST00000464867 BAHCC1Q9P281 2608 aa11.27□□□□□ -0.61
APP-213ENST00000464867 COL4A6Q14031 1691 aa11.27□□□□□ -0.61
APP-213ENST00000464867 MED19A0JLT2 244 aaPredicted RBP11.26□□□□□ -0.61
APP-213ENST00000464867 AMHP03971 560 aa11.26□□□□□ -0.61
APP-213ENST00000464867 GNAI3P08754 354 aa11.26□□□□□ -0.61
APP-213ENST00000464867 LTBRP36941 435 aa11.26□□□□□ -0.61
APP-213ENST00000464867 OAZ1P54368 228 aa11.26□□□□□ -0.61
APP-213ENST00000464867 CHMP4BP1P59074 171 aa11.26□□□□□ -0.61
APP-213ENST00000464867 OS9Q13438 667 aaPredicted RBP11.26□□□□□ -0.61
APP-213ENST00000464867 DUSP28Q4G0W2 176 aa11.26□□□□□ -0.61
APP-213ENST00000464867 TNNI3KQ59H18 835 aa11.26□□□□□ -0.61
APP-213ENST00000464867 LRRC8DQ7L1W4 858 aa11.26□□□□□ -0.61
APP-213ENST00000464867 FAM133AQ8N9E0 248 aa11.26□□□□□ -0.61
APP-213ENST00000464867 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
APP-213ENST00000464867 ZNF775Q96BV0 537 aaPredicted RBP11.26□□□□□ -0.61
APP-213ENST00000464867 DYNLL2Q96FJ2 89 aa11.26□□□□□ -0.61
APP-213ENST00000464867 ACAD9Q9H845 621 aa11.26□□□□□ -0.61
APP-213ENST00000464867 GPR108Q9NPR9 543 aa11.26□□□□□ -0.61
APP-213ENST00000464867 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
APP-213ENST00000464867 FPGT-TNNI3KV9GXZ4 949 aa11.26□□□□□ -0.61
APP-213ENST00000464867 SCN10AQ9Y5Y9 1956 aa11.25□□□□□ -0.61
APP-213ENST00000464867 PTGS1P23219 599 aa11.25□□□□□ -0.61
APP-213ENST00000464867 WNT7BP56706 349 aa11.25□□□□□ -0.61
APP-213ENST00000464867 MTX1Q13505 466 aa11.25□□□□□ -0.61
APP-213ENST00000464867 CTC1Q2NKJ3 1217 aa11.25□□□□□ -0.61
APP-213ENST00000464867 TAPT1Q6NXT6 567 aa11.25□□□□□ -0.61
APP-213ENST00000464867 FBXO16Q8IX29 292 aaPredicted RBP11.25□□□□□ -0.61
APP-213ENST00000464867 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
APP-213ENST00000464867 NUP88Q99567 741 aaPredicted RBP11.25□□□□□ -0.61
APP-213ENST00000464867 RIOK1Q9BRS2 568 aaKnown RBP11.25□□□□□ -0.61
APP-213ENST00000464867 WDR11Q9BZH6 1224 aa11.25□□□□□ -0.61
APP-213ENST00000464867 SLC38A10Q9HBR0 1119 aa11.25□□□□□ -0.61
APP-213ENST00000464867 SLC24A3Q9HC58 644 aa11.25□□□□□ -0.61
APP-213ENST00000464867 ALG13Q9NP73 1137 aaKnown RBP11.25□□□□□ -0.61
APP-213ENST00000464867 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
APP-213ENST00000464867 ZNF292O60281 2723 aa11.25□□□□□ -0.61
APP-213ENST00000464867 ACACBO00763 2458 aa11.25□□□□□ -0.61
APP-213ENST00000464867 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
APP-213ENST00000464867 NLRC5Q86WI3 1866 aa11.24□□□□□ -0.61
APP-213ENST00000464867 CXCL10P02778 98 aa11.24□□□□□ -0.61
APP-213ENST00000464867 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
APP-213ENST00000464867 CYP2D6P10635 497 aa11.24□□□□□ -0.61
APP-213ENST00000464867 CDK8P49336 464 aa11.24□□□□□ -0.61
APP-213ENST00000464867 PDE4DQ08499 809 aa11.24□□□□□ -0.61
APP-213ENST00000464867 TMEM192Q8IY95 271 aa11.24□□□□□ -0.61
APP-213ENST00000464867 MYOCDQ8IZQ8 938 aa11.24□□□□□ -0.61
APP-213ENST00000464867 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
APP-213ENST00000464867 YME1L1Q96TA2 773 aa11.24□□□□□ -0.61
APP-213ENST00000464867 MEIS3Q99687 375 aa11.24□□□□□ -0.61
APP-213ENST00000464867 IGFLR1Q9H665 355 aa11.24□□□□□ -0.61
APP-213ENST00000464867 DCP1AQ9NPI6 582 aaPredicted RBP11.24□□□□□ -0.61
APP-213ENST00000464867 FEM1BQ9UK73 627 aa11.24□□□□□ -0.61
APP-213ENST00000464867 MICAL3Q7RTP6 2002 aa11.24□□□□□ -0.61
APP-213ENST00000464867 F5H6K3 240 aa11.23□□□□□ -0.61
APP-213ENST00000464867 NDUFV1P49821 464 aa11.23□□□□□ -0.61
APP-213ENST00000464867 KLRC3Q07444 240 aa11.23□□□□□ -0.61
APP-213ENST00000464867 DLX2Q07687 328 aaPredicted RBP11.23□□□□□ -0.61
APP-213ENST00000464867 PTPRNQ16849 979 aa11.23□□□□□ -0.61
APP-213ENST00000464867 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
APP-213ENST00000464867 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
APP-213ENST00000464867 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
APP-213ENST00000464867 FBXO11Q86XK2 927 aa11.23□□□□□ -0.61
APP-213ENST00000464867 SDR42E1Q8WUS8 393 aa11.23□□□□□ -0.61
APP-213ENST00000464867 PPP2R3CQ969Q6 453 aa11.23□□□□□ -0.61
APP-213ENST00000464867 CNTNAP3BQ96NU0 1288 aa11.23□□□□□ -0.61
APP-213ENST00000464867 CNTNAP3Q9BZ76 1288 aa11.23□□□□□ -0.61
APP-213ENST00000464867 API5Q9BZZ5 524 aaKnown RBP11.23□□□□□ -0.61
APP-213ENST00000464867 LMAN2LQ9H0V9 348 aa11.23□□□□□ -0.61
APP-213ENST00000464867 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
APP-213ENST00000464867 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
APP-213ENST00000464867 RNF146Q9NTX7 359 aa11.23□□□□□ -0.61
APP-213ENST00000464867 EP300Q09472 2414 aaPredicted RBP11.23□□□□□ -0.61
APP-213ENST00000464867 LOC730098B7Z3J9 87 aa11.22□□□□□ -0.61
APP-213ENST00000464867 AXIN1O15169 862 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms