RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 PCDHB13Q9Y5F0 798 aa9.47□□□□□ -0.89
ACTB-208ENST00000464611 DDX60LQ5H9U9 1706 aaKnown RBP9.47□□□□□ -0.89
ACTB-208ENST00000464611 FOCADQ5VW36 1801 aa9.47□□□□□ -0.89
ACTB-208ENST00000464611 CYP3A7-CYP3A51PA0A087WV96 503 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 RIMBP2O15034 1052 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 ZBTB5O15062 677 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 MARCH6O60337 910 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 ECE2O60344 883 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 CYP3A7P24462 503 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 TECP42680 631 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 ERVK-24P63145 666 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 VWA3BQ502W6 1294 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 CCDC122Q5T0U0 273 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 USP17L2Q6R6M4 530 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 ZNF771Q7L3S4 317 aaPredicted RBP9.46□□□□□ -0.9
ACTB-208ENST00000464611 KIAA1328Q86T90 577 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 CCDC65Q8IXS2 484 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 SLC35F6Q8N357 371 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 RNF10Q8N5U6 811 aaKnown RBP9.46□□□□□ -0.9
ACTB-208ENST00000464611 RASGRP4Q8TDF6 673 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 RAD54LQ92698 747 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 TEKT1Q969V4 418 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 CNOT6LQ96LI5 555 aaKnown RBP9.46□□□□□ -0.9
ACTB-208ENST00000464611 CCDC42Q96M95 316 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 GPR101Q96P66 508 aaPredicted RBP9.46□□□□□ -0.9
ACTB-208ENST00000464611 UBXN6Q9BZV1 441 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 TTYH3Q9C0H2 523 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 VIPAS39Q9H9C1 493 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 KANSL2Q9H9L4 492 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 ZNF446Q9NWS9 450 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 PSD3Q9NYI0 1048 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 RNF181Q9P0P0 153 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 NYAP2Q9P242 653 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 PCDHA12Q9UN75 941 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 SAR1BQ9Y6B6 198 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 PITPNM2Q9BZ72 1349 aa9.46□□□□□ -0.9
ACTB-208ENST00000464611 CDK5RAP2Q96SN8 1893 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 SSU72P8A0A1W2PR75 194 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 PES1O00541 588 aaKnown RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 MAP2K7O14733 419 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 TACC1O75410 805 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 CLSTN1O94985 981 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 LCA5LO95447 670 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 ARHGAP25P42331 645 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 TXKP42681 527 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 CLK2P49760 499 aaKnown RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 VAV2P52735 878 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 MARSP56192 900 aaKnown RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 EIF6P56537 245 aaKnown RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 FKBP3Q00688 224 aaKnown RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 MTF1Q14872 753 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 TMEM119Q4V9L6 283 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 C10orf76Q5T2E6 689 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 ANKRD40Q6AI12 368 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 FMNL3Q8IVF7 1028 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 ERMNQ8TAM6 284 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 PCMTD1Q96MG8 357 aaPredicted RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 SLF1Q9BQI6 1058 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 MMTAG2Q9BU76 263 aaKnown RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 MXD3Q9BW11 206 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 NDST4Q9H3R1 872 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 PSTPIP2Q9H939 334 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 USP40Q9NVE5 1235 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 BIN2Q9UBW5 565 aaPredicted RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 PRDM4Q9UKN5 801 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 JRKLQ9Y4A0 524 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 DAAM1Q9Y4D1 1078 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 COL4A5P29400 1685 aa9.45□□□□□ -0.9
ACTB-208ENST00000464611 ZNF646O15015 1829 aaPredicted RBP9.45□□□□□ -0.9
ACTB-208ENST00000464611 A0A0U1RQG5 324 aaPredicted RBP9.44□□□□□ -0.9
ACTB-208ENST00000464611 TBC1D8O95759 1140 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 GOLGA8HP0CJ92 632 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 MUTP22033 750 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 ANXA13P27216 316 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 CDC25AP30304 524 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 GTF2IP78347 998 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 AMPD2Q01433 879 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 EHHADHQ08426 723 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 STK4Q13043 487 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 GRB10Q13322 594 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 SMC1AQ14683 1233 aaKnown RBP9.44□□□□□ -0.9
ACTB-208ENST00000464611 LONRF2Q1L5Z9 754 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 C9orf131Q5VYM1 1079 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 HAUS3Q68CZ6 603 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 TRAPPC11Q7Z392 1133 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 ADGRF4Q8IZF3 695 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 MYOCDQ8IZQ8 938 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 SLC44A5Q8NCS7 719 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 JAKMIP2Q96AA8 810 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 FAM20AQ96MK3 541 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 ZDHHC15Q96MV8 337 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 MBOAT7Q96N66 472 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 ALS2CR12Q96Q35 445 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 HS3ST6Q96QI5 342 aa9.44□□□□□ -0.9
ACTB-208ENST00000464611 PURBQ96QR8 312 aaKnown RBP9.44□□□□□ -0.9
ACTB-208ENST00000464611 ARID3AQ99856 593 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms