RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CDIP1Q9H305 208 aa6□□□□□ -1.45
CLK1-208ENST00000464454 RXFP1Q9HBX9 757 aa6□□□□□ -1.45
CLK1-208ENST00000464454 RFXAPO00287 272 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 GSTA4O15217 222 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 SGSM2O43147 1006 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 KCNQ2O43526 872 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 GNAT1P11488 350 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 FNDC3BQ53EP0 1204 aaKnown RBP5.99□□□□□ -1.45
CLK1-208ENST00000464454 AMIGO3Q86WK7 504 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 ANKLE2Q86XL3 938 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 SIGLEC10Q96LC7 697 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 MAGEB10Q96LZ2 347 aaPredicted RBP5.99□□□□□ -1.45
CLK1-208ENST00000464454 SGPP1Q9BX95 441 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 KANSL2Q9H9L4 492 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 SLC52A2Q9HAB3 445 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 GCM1Q9NP62 436 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 SLC6A20Q9NP91 592 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 CD320Q9NPF0 282 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 FANCLQ9NW38 375 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 PALD1Q9ULE6 856 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 FAN1Q9Y2M0 1017 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 SIT1Q9Y3P8 196 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 PCDHA5Q9Y5H7 936 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 HCFC2Q9Y5Z7 792 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 IRAK3Q9Y616 596 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 IRS2Q9Y4H2 1338 aa5.99□□□□□ -1.45
CLK1-208ENST00000464454 ESYT3A0FGR9 886 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 ARVCFO00192 962 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 WNT9AO14904 365 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 CDC45O75419 566 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 C1QTNF9P0C862 333 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 FBLN1P23142 703 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 JAG1P78504 1218 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 TCEA2Q15560 299 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 FAM47CQ5HY64 1035 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 ETV3LQ6ZN32 361 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 OTOP3Q7RTS5 596 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 MILR1Q7Z6M3 343 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 ZC3H7AQ8IWR0 971 aaKnown RBP5.98□□□□□ -1.45
CLK1-208ENST00000464454 TRIM48Q8IWZ4 208 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 CPA5Q8WXQ8 436 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 JAM3Q9BX67 310 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 SMOC1Q9H4F8 434 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 IPPKQ9H8X2 491 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 NGRNQ9NPE2 291 aaKnown RBP5.98□□□□□ -1.45
CLK1-208ENST00000464454 PPARGC1AQ9UBK2 798 aaKnown RBP5.98□□□□□ -1.45
CLK1-208ENST00000464454 PCDHB4Q9Y5E5 795 aa5.98□□□□□ -1.45
CLK1-208ENST00000464454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.97□□□□□ -1.45
CLK1-208ENST00000464454 IRS4O14654 1257 aaPredicted RBP5.97□□□□□ -1.45
CLK1-208ENST00000464454 BUB1BO60566 1050 aaPredicted RBP5.97□□□□□ -1.45
CLK1-208ENST00000464454 TADA3O75528 432 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 ASMTLO95671 621 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 CRTAMO95727 393 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 KRT1P04264 644 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 ASGR2P07307 311 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 PMLP29590 882 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 EPHB3P54753 998 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 ST5P78524 1137 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 KCNA10Q16322 511 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 PLEKHG4Q58EX7 1191 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 C16orf86Q6ZW13 317 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 ZC3H18Q86VM9 953 aaKnown RBP5.97□□□□□ -1.45
CLK1-208ENST00000464454 MIB1Q86YT6 1006 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 PIP4K2CQ8TBX8 421 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 FBXW5Q969U6 566 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 DDX11Q96FC9 970 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 KCNJ15Q99712 375 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 YIPF4Q9BSR8 244 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 PCDH18Q9HCL0 1135 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 MYOTQ9UBF9 498 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 CNOT6Q9ULM6 557 aaKnown RBP5.97□□□□□ -1.45
CLK1-208ENST00000464454 SMG5Q9UPR3 1016 aaKnown RBP5.97□□□□□ -1.45
CLK1-208ENST00000464454 PCDHA8Q9Y5H6 950 aa5.97□□□□□ -1.45
CLK1-208ENST00000464454 SBNO2Q9Y2G9 1366 aa5.96□□□□□ -1.45
CLK1-208ENST00000464454 RFPL3O75679 317 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 ZNF385BQ569K4 471 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 TAF7LQ5H9L4 462 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 BRAPQ7Z569 592 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 IGDCC3Q8IVU1 814 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 FAM126BQ8IXS8 530 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 UHMK1Q8TAS1 419 aaKnown RBP5.96□□□□□ -1.46
CLK1-208ENST00000464454 SLC7A14Q8TBB6 771 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 TOX2Q96NM4 488 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 PCDHA9Q9Y5H5 950 aa5.96□□□□□ -1.46
CLK1-208ENST00000464454 DBX1A6NMT0 343 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 B4E1Z4 1266 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 RAPGEF3O95398 923 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 NPTXRO95502 500 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 IGFBP6P24592 240 aaPredicted RBP5.95□□□□□ -1.46
CLK1-208ENST00000464454 NCKAP1LP55160 1127 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 LINC00310P59036 64 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 CACNB2Q08289 660 aaPredicted RBP5.95□□□□□ -1.46
CLK1-208ENST00000464454 ZNF124Q15973 351 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 HABP4Q5JVS0 413 aaKnown RBP5.95□□□□□ -1.46
CLK1-208ENST00000464454 C16orf59Q7L2K0 433 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 B3GNT8Q7Z7M8 397 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 PCDH19Q8TAB3 1148 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 SLKQ9H2G2 1235 aaPredicted RBP5.95□□□□□ -1.46
CLK1-208ENST00000464454 TRIM39Q9HCM9 518 aa5.95□□□□□ -1.46
CLK1-208ENST00000464454 ASH2LQ9UBL3 628 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms