RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PURAQ00577 322 aaKnown RBP19.49■□□□□ 0.71
VPS52-215ENST00000464425 LAMC2Q13753 1193 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 CELF3Q5SZQ8 465 aaKnown RBP19.49■□□□□ 0.71
VPS52-215ENST00000464425 CHRDL2Q6WN34 429 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
VPS52-215ENST00000464425 ANO3Q9BYT9 981 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 POLR3EQ9NVU0 708 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 PRKAG2Q9UGJ0 569 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 ESYT2A0FGR8 921 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 CDKL5O76039 1030 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 DEXIO95424 95 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 GGPS1O95749 300 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 MMP3P08254 477 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 ICAM3P32942 547 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 CLK2P49760 499 aaKnown RBP19.48■□□□□ 0.71
VPS52-215ENST00000464425 CDK7P50613 346 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 CHMP4BP1P59074 171 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 SEMA3FQ13275 785 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 ITGA7Q13683 1181 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 MYSM1Q5VVJ2 828 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 SH3RF1Q7Z6J0 888 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 NLRX1Q86UT6 975 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 AIFM3Q96NN9 605 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 MTG1Q9BT17 334 aaPredicted RBP19.48■□□□□ 0.71
VPS52-215ENST00000464425 MLXIPQ9HAP2 919 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 GRIN2DO15399 1336 aa19.48■□□□□ 0.71
VPS52-215ENST00000464425 DCDC2CA8MYV0 355 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 FIBPO43427 364 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 KPNA6O60684 536 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 CTDNEP1O95476 244 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 ITGB5P18084 799 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 GNA11P29992 359 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 NLRP5P59047 1200 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 AP3B2Q13367 1082 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 ANKRD33Q7Z3H0 272 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 TEX2Q8IWB9 1127 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 CCDC148Q8NFR7 591 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 RASGRP4Q8TDF6 673 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 PPP1R13LQ8WUF5 828 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 EMID1Q96A84 441 aaPredicted RBP19.47■□□□□ 0.71
VPS52-215ENST00000464425 SPATA33Q96N06 139 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 PDLIM7Q9NR12 457 aa19.47■□□□□ 0.71
VPS52-215ENST00000464425 SH2B1Q9NRF2 756 aaPredicted RBP19.47■□□□□ 0.71
VPS52-215ENST00000464425 COLQQ9Y215 455 aaPredicted RBP19.47■□□□□ 0.71
VPS52-215ENST00000464425 TRIM43BA6NCK2 446 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 CLTBP09497 229 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 MDM2Q00987 491 aaPredicted RBP19.46■□□□□ 0.71
VPS52-215ENST00000464425 FAAP100Q0VG06 881 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 CYFIP1Q7L576 1253 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 REXO1Q8N1G1 1221 aaKnown RBP19.46■□□□□ 0.71
VPS52-215ENST00000464425 PPTC7Q8NI37 304 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 CYP2W1Q8TAV3 490 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 GTF3C6Q969F1 213 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 TRIM43Q96BQ3 446 aaPredicted RBP19.46■□□□□ 0.71
VPS52-215ENST00000464425 TOX2Q96NM4 488 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 SH3GLB2Q9NR46 395 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 TMEM39AQ9NV64 488 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 PKD2L1Q9P0L9 805 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 UBIAD1Q9Y5Z9 338 aa19.46■□□□□ 0.71
VPS52-215ENST00000464425 MAGEA10P43363 369 aaPredicted RBP19.45■□□□□ 0.7
VPS52-215ENST00000464425 NEDD9Q14511 834 aa19.45■□□□□ 0.7
VPS52-215ENST00000464425 DGKDQ16760 1214 aa19.45■□□□□ 0.7
VPS52-215ENST00000464425 HSDL1Q3SXM5 330 aa19.45■□□□□ 0.7
VPS52-215ENST00000464425 SLC43A3Q8NBI5 491 aa19.45■□□□□ 0.7
VPS52-215ENST00000464425 BICD2Q8TD16 824 aa19.45■□□□□ 0.7
VPS52-215ENST00000464425 GPRASP2Q96D09 838 aa19.45■□□□□ 0.7
VPS52-215ENST00000464425 JADE2Q9NQC1 790 aa19.45■□□□□ 0.7
VPS52-215ENST00000464425 MROH7Q68CQ1 1323 aa19.45■□□□□ 0.7
VPS52-215ENST00000464425 ATP9AO75110 1047 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 CD2BP2O95400 341 aaKnown RBP19.44■□□□□ 0.7
VPS52-215ENST00000464425 ZNF76P36508 570 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 SREBF1P36956 1147 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 ARHGAP4P98171 946 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 MTMR1Q13613 665 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 NBPF20Q3BBV1 942 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 FAM47CQ5HY64 1035 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 FAM126BQ8IXS8 530 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 LBHD1Q9BQE6 289 aaPredicted RBP19.44■□□□□ 0.7
VPS52-215ENST00000464425 MXRA8Q9BRK3 442 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 TRPV6Q9H1D0 765 aa19.44■□□□□ 0.7
VPS52-215ENST00000464425 ORC3Q9UBD5 711 aaPredicted RBP19.44■□□□□ 0.7
VPS52-215ENST00000464425 ZNF286BP0CG31 522 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 SP4Q02446 784 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 METTL7BQ6UX53 244 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 KAT2BQ92831 832 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 CDHR1Q96JP9 859 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 PCDHA4Q9UN74 947 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 KCNJ14Q9UNX9 436 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 TELO2Q9Y4R8 837 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 STK36Q9NRP7 1315 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 MYH7BA7E2Y1 1941 aa19.43■□□□□ 0.7
VPS52-215ENST00000464425 NOP56O00567 594 aaKnown RBP19.42■□□□□ 0.7
VPS52-215ENST00000464425 TLR3O15455 904 aaKnown RBP19.42■□□□□ 0.7
VPS52-215ENST00000464425 PPFIA4O75335 1185 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 ARP10275 920 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 KCNA2P16389 499 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 ITGB8P26012 769 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 CEP55Q53EZ4 464 aa19.42■□□□□ 0.7
VPS52-215ENST00000464425 MCTP2Q6DN12 878 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms