RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 NKX3-2P78367 333 aa22.54■■□□□ 1.2
COL9A3-204ENST00000463487 SETQ01105 290 aaPredicted RBP22.54■■□□□ 1.2
COL9A3-204ENST00000463487 NPY5RQ15761 445 aa22.54■■□□□ 1.2
COL9A3-204ENST00000463487 LY6KQ17RY6 165 aa22.54■■□□□ 1.2
COL9A3-204ENST00000463487 GNASQ5JWF2 1037 aa22.54■■□□□ 1.2
COL9A3-204ENST00000463487 GJC2Q5T442 439 aaPredicted RBP22.54■■□□□ 1.2
COL9A3-204ENST00000463487 NIPA1Q7RTP0 329 aa22.54■■□□□ 1.2
COL9A3-204ENST00000463487 DHX37Q8IY37 1157 aaKnown RBP22.54■■□□□ 1.2
COL9A3-204ENST00000463487 INTS4Q96HW7 963 aaKnown RBP22.54■■□□□ 1.2
COL9A3-204ENST00000463487 NAP1L4Q99733 375 aaKnown RBP22.54■■□□□ 1.2
COL9A3-204ENST00000463487 MXRA8Q9BRK3 442 aa22.54■■□□□ 1.2
COL9A3-204ENST00000463487 JADE2Q9NQC1 790 aa22.54■■□□□ 1.2
COL9A3-204ENST00000463487 GJB4Q9NTQ9 266 aa22.54■■□□□ 1.2
COL9A3-204ENST00000463487 M0R2N6 131 aa22.53■■□□□ 1.2
COL9A3-204ENST00000463487 LAMC2Q13753 1193 aa22.53■■□□□ 1.2
COL9A3-204ENST00000463487 FSCN1Q16658 493 aaKnown RBP22.53■■□□□ 1.2
COL9A3-204ENST00000463487 DIS3L2Q8IYB7 885 aaKnown RBP22.53■■□□□ 1.2
COL9A3-204ENST00000463487 FBXO18Q8NFZ0 1043 aa22.53■■□□□ 1.2
COL9A3-204ENST00000463487 TBCKQ8TEA7 893 aa22.53■■□□□ 1.2
COL9A3-204ENST00000463487 ZFP91Q96JP5 570 aaPredicted RBP22.53■■□□□ 1.2
COL9A3-204ENST00000463487 SENP7Q9BQF6 1050 aa22.53■■□□□ 1.2
COL9A3-204ENST00000463487 C11orf49Q9H6J7 331 aa22.53■■□□□ 1.2
COL9A3-204ENST00000463487 MLXIPQ9HAP2 919 aa22.53■■□□□ 1.2
COL9A3-204ENST00000463487 H3BQV1 296 aa22.52■■□□□ 1.2
COL9A3-204ENST00000463487 ARIH2O95376 493 aa22.52■■□□□ 1.2
COL9A3-204ENST00000463487 ITGB5P18084 799 aa22.52■■□□□ 1.2
COL9A3-204ENST00000463487 IFFO2Q5TF58 517 aa22.52■■□□□ 1.2
COL9A3-204ENST00000463487 KLHDC9Q8NEP7 349 aa22.52■■□□□ 1.2
COL9A3-204ENST00000463487 EMID1Q96A84 441 aaPredicted RBP22.52■■□□□ 1.2
COL9A3-204ENST00000463487 PAWRQ96IZ0 340 aaKnown RBP22.52■■□□□ 1.2
COL9A3-204ENST00000463487 KPNA6O60684 536 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 GGPS1O95749 300 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 PDCP20941 246 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 UBA1P22314 1058 aaKnown RBP22.51■■□□□ 1.19
COL9A3-204ENST00000463487 GUCY1B3Q02153 619 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 CELF3Q5SZQ8 465 aaKnown RBP22.51■■□□□ 1.19
COL9A3-204ENST00000463487 PIK3AP1Q6ZUJ8 805 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 CRYGNQ8WXF5 182 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 HTATIP2Q9BUP3 242 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 POLR3EQ9NVU0 708 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 TCEAL9Q9UHQ7 104 aa22.51■■□□□ 1.19
COL9A3-204ENST00000463487 ADAMTS3O15072 1205 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 CABYRO75952 493 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 CIITAP33076 1130 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 ARHGAP1Q07960 439 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 KCNA10Q16322 511 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 MOXD1Q6UVY6 613 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 METTL7BQ6UX53 244 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 NEK8Q86SG6 692 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 PLA2G4DQ86XP0 818 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 PPTC7Q8NI37 304 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 OXER1Q8TDS5 423 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 GLT1D1Q96MS3 346 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 SDF4Q9BRK5 362 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 FOXP1Q9H334 677 aaPredicted RBP22.5■■□□□ 1.19
COL9A3-204ENST00000463487 KCNH7Q9NS40 1196 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 PHF24Q9UPV7 400 aa22.5■■□□□ 1.19
COL9A3-204ENST00000463487 MYH7BA7E2Y1 1941 aa22.49■■□□□ 1.19
COL9A3-204ENST00000463487 BTBD18B2RXH4 712 aa22.49■■□□□ 1.19
COL9A3-204ENST00000463487 MEIS1O00470 390 aa22.49■■□□□ 1.19
COL9A3-204ENST00000463487 NOP56O00567 594 aaKnown RBP22.49■■□□□ 1.19
COL9A3-204ENST00000463487 GCFC2P16383 781 aaKnown RBP22.49■■□□□ 1.19
COL9A3-204ENST00000463487 RGS19P49795 217 aa22.49■■□□□ 1.19
COL9A3-204ENST00000463487 ACLYP53396 1101 aa22.49■■□□□ 1.19
COL9A3-204ENST00000463487 PRR16Q569H4 304 aa22.49■■□□□ 1.19
COL9A3-204ENST00000463487 COPS5Q92905 334 aa22.49■■□□□ 1.19
COL9A3-204ENST00000463487 SPATA33Q96N06 139 aa22.49■■□□□ 1.19
COL9A3-204ENST00000463487 SENP6Q9GZR1 1112 aaPredicted RBP22.49■■□□□ 1.19
COL9A3-204ENST00000463487 MYADML2A6NDP7 307 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 A6NJR5 290 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 ASGR1P07306 291 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 BEX3Q00994 111 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 NR5A1Q13285 461 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 DGKDQ16760 1214 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 INF2Q27J81 1249 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 TMEM63BQ5T3F8 832 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 MYSM1Q5VVJ2 828 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 LARP1BQ659C4 914 aaKnown RBP22.48■■□□□ 1.19
COL9A3-204ENST00000463487 UBE2Q1Q7Z7E8 422 aa22.48■■□□□ 1.19
COL9A3-204ENST00000463487 DIS3LQ8TF46 1054 aaKnown RBP22.48■■□□□ 1.19
COL9A3-204ENST00000463487 FAM86B1E9PN63 330 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 FAM86B2P0C5J1 330 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 COL6A1P12109 1028 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 SEMA3FQ13275 785 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 LETM2Q2VYF4 491 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 CCSAPQ6IQ19 270 aaPredicted RBP22.47■■□□□ 1.19
COL9A3-204ENST00000463487 AFG1LQ8WV93 481 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 VTI1AQ96AJ9 217 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 STARD7Q9NQZ5 370 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 BRCA2P51587 3418 aa22.47■■□□□ 1.19
COL9A3-204ENST00000463487 IGLV3-22A0A075B6J6 115 aa22.46■■□□□ 1.19
COL9A3-204ENST00000463487 A0A1W2PQ45 241 aaPredicted RBP22.46■■□□□ 1.19
COL9A3-204ENST00000463487 A0A1W2PQY0 241 aa22.46■■□□□ 1.19
COL9A3-204ENST00000463487 CTAGE5O15320 804 aa22.46■■□□□ 1.19
COL9A3-204ENST00000463487 MMP3P08254 477 aa22.46■■□□□ 1.19
COL9A3-204ENST00000463487 MYL3P08590 195 aa22.46■■□□□ 1.19
COL9A3-204ENST00000463487 KCNA2P16389 499 aa22.46■■□□□ 1.19
COL9A3-204ENST00000463487 MNX1P50219 401 aaPredicted RBP22.46■■□□□ 1.19
COL9A3-204ENST00000463487 SP2Q02086 613 aa22.46■■□□□ 1.19
COL9A3-204ENST00000463487 BECN1Q14457 450 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms