RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 ALG1Q9BT22 464 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 AGXT2Q9BYV1 514 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 MAP3K20Q9NYL2 800 aaKnown RBP9.9□□□□□ -0.82
TMEM254-208ENST00000463209 TBX21Q9UL17 535 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 PCDHA6Q9UN73 950 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 PCDHA8Q9Y5H6 950 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 SCN10AQ9Y5Y9 1956 aa9.9□□□□□ -0.83
TMEM254-208ENST00000463209 SMCO2A6NFE2 343 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 SPDYE3A6NKU9 549 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 CABYRO75952 493 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 LARGE1O95461 756 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 CD4P01730 458 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 ACRP10323 421 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 SCG2P13521 617 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 ITGB5P18084 799 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 AK2P54819 239 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 CCL23P55773 120 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 NTRK3Q16288 839 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 PFKFB3Q16875 520 aaPredicted RBP9.89□□□□□ -0.83
TMEM254-208ENST00000463209 C8orf34Q49A92 452 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 CELF3Q5SZQ8 465 aaKnown RBP9.89□□□□□ -0.83
TMEM254-208ENST00000463209 PCNX4Q63HM2 1172 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 CYFIP1Q7L576 1253 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 TRIM50Q86XT4 487 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 TDHQ8IZJ6 230 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 SLC43A3Q8NBI5 491 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 CYP2W1Q8TAV3 490 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 RASGRP4Q8TDF6 673 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 KAT2BQ92831 832 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 AIFM3Q96NN9 605 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 ANO3Q9BYT9 981 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 TM6SF1Q9BZW5 370 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 MAF1Q9H063 256 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 ALDH8A1Q9H2A2 487 aaPredicted RBP9.89□□□□□ -0.83
TMEM254-208ENST00000463209 BARHL2Q9NY43 387 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 VPS54Q9P1Q0 977 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 TPCN1Q9ULQ1 816 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 SCN5AQ14524 2016 aa9.89□□□□□ -0.83
TMEM254-208ENST00000463209 TANC1Q9C0D5 1861 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 TLR3O15455 904 aaKnown RBP9.88□□□□□ -0.83
TMEM254-208ENST00000463209 PRPF3O43395 683 aaKnown RBP9.88□□□□□ -0.83
TMEM254-208ENST00000463209 ATP9AO75110 1047 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 TIMP1P01033 207 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 CSF2RAP15509 400 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 BMP8BP34820 402 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 RCAN1P53805 252 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 EVCP57679 992 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 FPGSQ05932 587 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 HIC1Q14526 733 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 BRDTQ58F21 947 aaPredicted RBP9.88□□□□□ -0.83
TMEM254-208ENST00000463209 MYSM1Q5VVJ2 828 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 PPP1R18Q6NYC8 613 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 FBXL16Q8N461 479 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 SAMD3Q8N6K7 520 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 NECAB1Q8N987 351 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 PPTC7Q8NI37 304 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 SCLYQ96I15 445 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 TOX2Q96NM4 488 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 INPP4AQ96PE3 977 aaPredicted RBP9.88□□□□□ -0.83
TMEM254-208ENST00000463209 WNT8AQ9H1J5 351 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 MLXIPQ9HAP2 919 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 RIC8AQ9NPQ8 531 aa9.88□□□□□ -0.83
TMEM254-208ENST00000463209 MROH7Q68CQ1 1323 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 CCDC196A0A1B0GTZ2 297 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 SPATA31C2B4DYI2 1134 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 FIBPO43427 364 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 EPB41L2O43491 1005 aaKnown RBP9.87□□□□□ -0.83
TMEM254-208ENST00000463209 PSEN2P49810 448 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 FOSBP53539 338 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 ZNF200P98182 395 aaPredicted RBP9.87□□□□□ -0.83
TMEM254-208ENST00000463209 SCRN1Q12765 414 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 LAMC2Q13753 1193 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 MFSD10Q14728 455 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 DGKDQ16760 1214 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 GNPTABQ3T906 1256 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 UTP14CQ5TAP6 766 aaKnown RBP9.87□□□□□ -0.83
TMEM254-208ENST00000463209 GDF6Q6KF10 455 aaPredicted RBP9.87□□□□□ -0.83
TMEM254-208ENST00000463209 Q7L0L9 218 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 C16orf59Q7L2K0 433 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 NOC4LQ9BVI4 516 aaKnown RBP9.87□□□□□ -0.83
TMEM254-208ENST00000463209 HIPK3Q9H422 1215 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 GJB4Q9NTQ9 266 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 HDAC6Q9UBN7 1215 aa9.87□□□□□ -0.83
TMEM254-208ENST00000463209 DDX39AO00148 427 aaKnown RBP9.86□□□□□ -0.83
TMEM254-208ENST00000463209 NOP56O00567 594 aaKnown RBP9.86□□□□□ -0.83
TMEM254-208ENST00000463209 CPLX1O14810 134 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 ARP10275 920 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 KCNA2P16389 499 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 IFNAR1P17181 557 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 ICAM3P32942 547 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 CLK2P49760 499 aaKnown RBP9.86□□□□□ -0.83
TMEM254-208ENST00000463209 AKAP17AQ02040 695 aaKnown RBP9.86□□□□□ -0.83
TMEM254-208ENST00000463209 MTMR1Q13613 665 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 PTGISQ16647 500 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 KIAA0753Q2KHM9 967 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 MFSD5Q6N075 450 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 NLRX1Q86UT6 975 aa9.86□□□□□ -0.83
TMEM254-208ENST00000463209 DHX38Q92620 1227 aaKnown RBP9.86□□□□□ -0.83
TMEM254-208ENST00000463209 WNT8BQ93098 351 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms