RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 ACTN1P12814 892 aa22.86■■□□□ 1.25
MSH5-210ENST00000463094 UBA1P22314 1058 aaKnown RBP22.86■■□□□ 1.25
MSH5-210ENST00000463094 PSEN2P49810 448 aa22.86■■□□□ 1.25
MSH5-210ENST00000463094 COL9A3Q14050 684 aaPredicted RBP22.86■■□□□ 1.25
MSH5-210ENST00000463094 MFSD10Q14728 455 aa22.86■■□□□ 1.25
MSH5-210ENST00000463094 PCNX4Q63HM2 1172 aa22.86■■□□□ 1.25
MSH5-210ENST00000463094 PPP1R13LQ8WUF5 828 aa22.86■■□□□ 1.25
MSH5-210ENST00000463094 FRMPD4Q14CM0 1322 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 TMEM265A0A087WTH1 108 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 PITPNM1O00562 1244 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 MEIS2O14770 477 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 RGS20O76081 388 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 ZNF286BP0CG31 522 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 HSPA4P34932 840 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 RFC2P35250 354 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 RCAN1P53805 252 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 NAPAP54920 295 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 KIAA0753Q2KHM9 967 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 SESTD1Q86VW0 696 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 GIMAP8Q8ND71 665 aaPredicted RBP22.85■■□□□ 1.25
MSH5-210ENST00000463094 SCLYQ96I15 445 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 CDHR1Q96JP9 859 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 INPP4AQ96PE3 977 aaPredicted RBP22.85■■□□□ 1.25
MSH5-210ENST00000463094 WNT8AQ9H1J5 351 aa22.85■■□□□ 1.25
MSH5-210ENST00000463094 BAZ2BQ9UIF8 2168 aaKnown RBP22.84■■□□□ 1.25
MSH5-210ENST00000463094 KIAA1217Q5T5P2 1943 aa22.84■■□□□ 1.25
MSH5-210ENST00000463094 ZBBXA8MT70 800 aa22.84■■□□□ 1.25
MSH5-210ENST00000463094 F2P00734 622 aa22.84■■□□□ 1.25
MSH5-210ENST00000463094 METAP2P50579 478 aaKnown RBP eCLIP22.84■■□□□ 1.25
MSH5-210ENST00000463094 C16orf59Q7L2K0 433 aa22.84■■□□□ 1.25
MSH5-210ENST00000463094 OTOP2Q7RTS6 562 aa22.84■■□□□ 1.25
MSH5-210ENST00000463094 CAGE1Q8TC20 777 aa22.84■■□□□ 1.25
MSH5-210ENST00000463094 HERVK_113Q902F9 699 aa22.84■■□□□ 1.25
MSH5-210ENST00000463094 BRPF3Q9ULD4 1205 aa22.84■■□□□ 1.25
MSH5-210ENST00000463094 SPATA31C2B4DYI2 1134 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 hCG_1984214I3L0E3 225 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 DNAJB2P25686 324 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 ICAM3P32942 547 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 MRPS9P82933 396 aaKnown RBP22.83■■□□□ 1.25
MSH5-210ENST00000463094 HSDL1Q3SXM5 330 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 PPP1R18Q6NYC8 613 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 METTL7BQ6UX53 244 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 Q6ZUG5 572 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 DEFB128Q7Z7B8 93 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 ZNF713Q8N859 430 aaPredicted RBP22.83■■□□□ 1.25
MSH5-210ENST00000463094 KAT2BQ92831 832 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 GPKOWQ92917 476 aaPredicted RBP eCLIP22.83■■□□□ 1.254e-8■■■■□ 19.5
MSH5-210ENST00000463094 FTOQ9C0B1 505 aaKnown RBP eCLIP22.83■■□□□ 1.25
MSH5-210ENST00000463094 GLT8D2Q9H1C3 349 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 SEMA6BQ9H3T3 888 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 PPP4R2Q9NY27 417 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 MSRAQ9UJ68 235 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 SNX14Q9Y5W7 946 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 SLC4A7Q9Y6M7 1214 aa22.83■■□□□ 1.25
MSH5-210ENST00000463094 V9GY48 417 aaPredicted RBP22.83■■□□□ 1.25
MSH5-210ENST00000463094 CENPBP07199 599 aaPredicted RBP22.82■■□□□ 1.24
MSH5-210ENST00000463094 SP2Q02086 613 aa22.82■■□□□ 1.24
MSH5-210ENST00000463094 RAB30Q15771 203 aa22.82■■□□□ 1.24
MSH5-210ENST00000463094 GDF6Q6KF10 455 aaPredicted RBP22.82■■□□□ 1.24
MSH5-210ENST00000463094 CYFIP1Q7L576 1253 aa22.82■■□□□ 1.24
MSH5-210ENST00000463094 TEX2Q8IWB9 1127 aa22.82■■□□□ 1.24
MSH5-210ENST00000463094 TIFAQ96CG3 184 aa22.82■■□□□ 1.24
MSH5-210ENST00000463094 HDAC6Q9UBN7 1215 aa22.82■■□□□ 1.24
MSH5-210ENST00000463094 GTF2IRD1Q9UHL9 959 aa22.82■■□□□ 1.24
MSH5-210ENST00000463094 CNTNAP5Q8WYK1 1306 aa22.82■■□□□ 1.24
MSH5-210ENST00000463094 ADCY7P51828 1080 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 AKAP17AQ02040 695 aaKnown RBP22.81■■□□□ 1.24
MSH5-210ENST00000463094 UBE2SQ16763 222 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 ERICH6BQ5W0A0 696 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 SLC17A8Q8NDX2 589 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 AFAP1L1Q8TED9 768 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 BRF1Q92994 677 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 USP26Q9BXU7 913 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 ZNF215Q9UL58 517 aaPredicted RBP22.81■■□□□ 1.24
MSH5-210ENST00000463094 PCDHA6Q9UN73 950 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 PCDHA8Q9Y5H6 950 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 SCN10AQ9Y5Y9 1956 aa22.81■■□□□ 1.24
MSH5-210ENST00000463094 H3BRB1 525 aa22.8■■□□□ 1.24
MSH5-210ENST00000463094 EPB41L2O43491 1005 aaKnown RBP22.8■■□□□ 1.24
MSH5-210ENST00000463094 PARNO95453 639 aaKnown RBP22.8■■□□□ 1.24
MSH5-210ENST00000463094 IQCF3P0C7M6 154 aa22.8■■□□□ 1.24
MSH5-210ENST00000463094 HOXD8P13378 290 aaPredicted RBP22.8■■□□□ 1.24
MSH5-210ENST00000463094 SP4Q02446 784 aa22.8■■□□□ 1.24
MSH5-210ENST00000463094 APOBRQ0VD83 1088 aa22.8■■□□□ 1.24
MSH5-210ENST00000463094 WWC2Q6AWC2 1192 aa22.8■■□□□ 1.24
MSH5-210ENST00000463094 KCNB2Q92953 911 aa22.8■■□□□ 1.24
MSH5-210ENST00000463094 GPRASP2Q96D09 838 aa22.8■■□□□ 1.24
MSH5-210ENST00000463094 SENP7Q9BQF6 1050 aa22.8■■□□□ 1.24
MSH5-210ENST00000463094 TUT1Q9H6E5 874 aaKnown RBP22.8■■□□□ 1.24
MSH5-210ENST00000463094 FOSP01100 380 aaPredicted RBP22.79■■□□□ 1.24
MSH5-210ENST00000463094 CPA1P15085 419 aa22.79■■□□□ 1.24
MSH5-210ENST00000463094 RPS6KB1P23443 525 aa22.79■■□□□ 1.24
MSH5-210ENST00000463094 MTMR1Q13613 665 aa22.79■■□□□ 1.24
MSH5-210ENST00000463094 RASIP1Q5U651 963 aa22.79■■□□□ 1.24
MSH5-210ENST00000463094 CCDC12Q8WUD4 166 aaPredicted RBP22.79■■□□□ 1.24
MSH5-210ENST00000463094 GUCD1Q96NT3 240 aa22.79■■□□□ 1.24
MSH5-210ENST00000463094 CDX2Q99626 313 aaPredicted RBP22.79■■□□□ 1.24
MSH5-210ENST00000463094 LAMA3Q16787 3333 aa22.79■■□□□ 1.24
MSH5-210ENST00000463094 HAS3O00219 553 aa22.78■■□□□ 1.24
MSH5-210ENST00000463094 LGALS2P05162 132 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms