RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KCNH7Q9NS40 1196 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 SLC5A4Q9NY91 659 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 FLRT1Q9NZU1 646 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 GABRQQ9UN88 632 aa16.25■□□□□ 0.19
COL6A1-202ENST00000463060 SYNGAP1Q96PV0 1343 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 CUTAO60888 179 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 FKTNO75072 461 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
COL6A1-202ENST00000463060 RGS2P41220 211 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL6A1-202ENST00000463060 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
COL6A1-202ENST00000463060 PDE4DQ08499 809 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 SPIRE1Q08AE8 756 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 CSPP1Q1MSJ5 1256 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 OLFML2BQ68BL8 750 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 B3GNT9Q6UX72 402 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 ARMCX2Q7L311 632 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 SLFN12Q8IYM2 578 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 KRI1Q8N9T8 703 aaKnown RBP16.24■□□□□ 0.19
COL6A1-202ENST00000463060 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
COL6A1-202ENST00000463060 ZNF296Q8WUU4 475 aaPredicted RBP16.24■□□□□ 0.19
COL6A1-202ENST00000463060 CLIC6Q96NY7 704 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 MPHOSPH6Q99547 160 aaKnown RBP16.24■□□□□ 0.19
COL6A1-202ENST00000463060 TINF2Q9BSI4 451 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 AGO4Q9HCK5 861 aaKnown RBP16.24■□□□□ 0.19
COL6A1-202ENST00000463060 MCM3APO60318 1980 aa16.24■□□□□ 0.19
COL6A1-202ENST00000463060 A0A1W2PQ27 194 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 A0A1W2PQ64 194 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 A0A1W2PQD8 194 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 RBM47A0AV96 593 aaKnown RBP16.23■□□□□ 0.19
COL6A1-202ENST00000463060 ATP9AO75110 1047 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 PSMD10O75832 226 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 ECM2O94769 699 aaPredicted RBP16.23■□□□□ 0.19
COL6A1-202ENST00000463060 GNRH1P01148 92 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 ME1P48163 572 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 FLT3LGP49771 235 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 MTMR1Q13613 665 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 PDIA5Q14554 519 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 KIF22Q14807 665 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 TAPT1Q6NXT6 567 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 DTHD1Q6ZMT9 781 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 NLRX1Q86UT6 975 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 IGSF22Q8N9C0 903 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 GJA10Q969M2 543 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 RIT2Q99578 217 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 APBA2Q99767 749 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 KIAA1217Q5T5P2 1943 aa16.23■□□□□ 0.19
COL6A1-202ENST00000463060 FAM237AA0A1B0GTK4 181 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 IPO5O00410 1097 aaKnown RBP16.22■□□□□ 0.19
COL6A1-202ENST00000463060 TGFB3P10600 412 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 KCNA2P16389 499 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 CYP2B6P20813 491 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 TXKP42681 527 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 ITGB3BPQ13352 177 aaPredicted RBP16.22■□□□□ 0.19
COL6A1-202ENST00000463060 IRF5Q13568 498 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 NFKBIBQ15653 356 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 CCL14Q16627 93 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 CCDC62Q6P9F0 684 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 SHC4Q6S5L8 630 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 CDHR1Q96JP9 859 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 CSRNP2Q9H175 543 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 TTC12Q9H892 705 aaPredicted RBP16.22■□□□□ 0.19
COL6A1-202ENST00000463060 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
COL6A1-202ENST00000463060 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 VAV3Q9UKW4 847 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 PCDHA12Q9UN75 941 aa16.22■□□□□ 0.19
COL6A1-202ENST00000463060 VWA3AA6NCI4 1184 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 GOLGA6L22H0YM25 854 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 CMA1P23946 247 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 LONP1P36776 959 aaKnown RBP16.21■□□□□ 0.19
COL6A1-202ENST00000463060 UBE2HP62256 183 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 SP2Q02086 613 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 PRKCZQ05513 592 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 GNPTABQ3T906 1256 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 OTOP1Q7RTM1 612 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 UIMC1Q96RL1 719 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 ZNF577Q9BSK1 485 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 BEGAINQ9BUH8 593 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 BCAS3Q9H6U6 928 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 VTA1Q9NP79 307 aa16.21■□□□□ 0.19
COL6A1-202ENST00000463060 CAPN15O75808 1086 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 TECP42680 631 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 PPP2R5CQ13362 524 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 RESP18Q5W5W9 173 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 USP49Q70CQ1 688 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 EEPD1Q7L9B9 569 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 AK8Q96MA6 479 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 PDGFCQ9NRA1 345 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 TBC1D22BQ9NU19 505 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 TSKSQ9UJT2 592 aa16.2■□□□□ 0.18
COL6A1-202ENST00000463060 NFASCO94856 1347 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 ARIH2O95376 493 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 HOXD10P28358 340 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 ACVR2BQ13705 512 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 LRCH2Q5VUJ6 765 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms