RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MAPK8IP1Q9UQF2 711 aa16.21■□□□□ 0.19
HDAC6-213ENST00000462730 COL11A1P12107 1806 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-213ENST00000462730 FAM86B1E9PN63 330 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 CYP3A4P08684 503 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 FAM86B2P0C5J1 330 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 ZNF76P36508 570 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 STAT3P40763 770 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 CDKAL1Q5VV42 579 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 VSTM4Q8IW00 320 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 ADSSL1Q8N142 457 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 LENG9Q96B70 501 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 ATG4CQ96DT6 458 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 WNK4Q96J92 1243 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 TMOD4Q9NZQ9 345 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 KDM3AQ9Y4C1 1321 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 TBX3O15119 743 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 PDE4DQ08499 809 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 STIM1Q13586 685 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 ECM1Q16610 540 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 MOB2Q70IA6 237 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 KCNK18Q7Z418 384 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 PNMA8AQ86V59 439 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-213ENST00000462730 CCDC150Q8NCX0 1101 aa16.2■□□□□ 0.18
HDAC6-213ENST00000462730 GIMAP8Q8ND71 665 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-213ENST00000462730 CTDP1Q9Y5B0 961 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-213ENST00000462730 MYMKA6NI61 221 aa16.19■□□□□ 0.18
HDAC6-213ENST00000462730 VWA5AO00534 786 aa16.19■□□□□ 0.18
HDAC6-213ENST00000462730 NFIBO00712 420 aa16.19■□□□□ 0.18
HDAC6-213ENST00000462730 ALAS1P13196 640 aa16.19■□□□□ 0.18
HDAC6-213ENST00000462730 TTLL12Q14166 644 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-213ENST00000462730 HYIQ5T013 277 aa16.19■□□□□ 0.18
HDAC6-213ENST00000462730 UTP14CQ5TAP6 766 aaKnown RBP16.19■□□□□ 0.18
HDAC6-213ENST00000462730 RBM46Q8TBY0 533 aaKnown RBP16.19■□□□□ 0.18
HDAC6-213ENST00000462730 EHMT1Q9H9B1 1298 aa16.19■□□□□ 0.18
HDAC6-213ENST00000462730 ELP3Q9H9T3 547 aa16.19■□□□□ 0.18
HDAC6-213ENST00000462730 LOC285556D6RIA3 1793 aa16.19■□□□□ 0.18
HDAC6-213ENST00000462730 SLC26A4O43511 780 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 ZBED4O75132 1171 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 POTEIP0CG38 1075 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 POTEJP0CG39 1038 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 PTPN21Q16825 1174 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 SH3D19Q5HYK7 790 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 ARMCX5Q6P1M9 558 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 CLMNQ96JQ2 1002 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 NT5C3AQ9H0P0 336 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 HOMER2Q9NSB8 354 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 MSH4O15457 936 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 FDX1P10109 184 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 CCZ1BP86790 482 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 CCZ1P86791 482 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-213ENST00000462730 NCAPH2Q6IBW4 605 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 ANKRD13AQ8IZ07 590 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 CYP2W1Q8TAV3 490 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 FAM20AQ96MK3 541 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 LRRC27Q9C0I9 530 aa16.18■□□□□ 0.18
HDAC6-213ENST00000462730 A0A1B0GTH6 734 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 POTEB3A0JP26 581 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 PSMA7O14818 248 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 SFPQP23246 707 aaKnown RBP eCLIP16.17■□□□□ 0.18
HDAC6-213ENST00000462730 DSG3P32926 999 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 HSD17B4P51659 736 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 UBXN2AP68543 259 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 SPIRE1Q08AE8 756 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 POTEBQ6S5H4 581 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 CATSPERGQ6ZRH7 1159 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 DYMQ7RTS9 669 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 APTXQ7Z2E3 356 aaKnown RBP16.17■□□□□ 0.18
HDAC6-213ENST00000462730 OTUD5Q96G74 571 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 GTPBP4Q9BZE4 634 aaKnown RBP16.17■□□□□ 0.18
HDAC6-213ENST00000462730 TRIM49BA6NDI0 452 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 FCER1AP12319 257 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 SKILP12757 684 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 COG2Q14746 738 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 MUM1L1Q5H9M0 696 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 CNNM4Q6P4Q7 775 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 UNC13DQ70J99 1090 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 REPS2Q8NFH8 660 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 ERMNQ8TAM6 284 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 KIAA1024Q9UPX6 916 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 CLEC11AQ9Y240 323 aa16.17■□□□□ 0.18
HDAC6-213ENST00000462730 IGLV3-22A0A075B6J6 115 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 PVALEFA0A1B0GWK0 134 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 RIOK3O14730 519 aaKnown RBP16.16■□□□□ 0.18
HDAC6-213ENST00000462730 IRF6O14896 467 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 MED24O75448 989 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 SSBP05455 408 aaKnown RBP eCLIP16.16■□□□□ 0.18
HDAC6-213ENST00000462730 STK4Q13043 487 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 NR1I3Q14994 352 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 TREML2Q5T2D2 321 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 MCF2L2Q86YR7 1114 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 DHTKD1Q96HY7 919 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-213ENST00000462730 CTAGE1Q96RT6 745 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 PNMA2Q9UL42 364 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 ADAMTS5Q9UNA0 930 aa16.16■□□□□ 0.18
HDAC6-213ENST00000462730 SPDYE5A6NIY4 337 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 E9PMD0 336 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 PMS1P54277 932 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms