RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 GCOM1H8Y6P7 765 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 EPHB6O15197 1021 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 BUB1O43683 1085 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 MARCH6O60337 910 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 PPP1R37O75864 691 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 FSBPO95073 299 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 FTCDO95954 541 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 PLEKP08567 350 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 USP17L8P0C7I0 530 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 MYZAPP0CAP1 466 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 GOLGA8HP0CJ92 632 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 CHRM1P11229 460 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 VEGFAP15692 232 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 GCFC2P16383 781 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 PLCG2P16885 1265 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 KLRK1P26718 216 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 PRDX5P30044 214 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 CXCR5P32302 372 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 HSPA9P38646 679 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 TXKP42681 527 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 TNNI2P48788 182 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 GUCY2FP51841 1108 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 RPS8P62241 208 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 FKBP3Q00688 224 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 SLC7A5Q01650 507 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 GUCY2DQ02846 1103 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 KLHL30Q0D2K2 578 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 COASYQ13057 564 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 GRB10Q13322 594 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 DRP2Q13474 957 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ITPK1Q13572 414 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 MTMR3Q13615 1198 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 CUL1Q13616 776 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 RAPGEF1Q13905 1077 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 PDIA5Q14554 519 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 PLCB4Q15147 1175 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 RPS6KA1Q15418 735 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 NAB2Q15742 525 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 SLC18A3Q16572 532 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 SKIDA1Q1XH10 827 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ASTE1Q2TB18 679 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 SLC4A8Q2Y0W8 1093 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 TMEM119Q4V9L6 283 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 SLC10A5Q5PT55 438 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 FAM26FQ5R3K3 315 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 RNF187Q5TA31 235 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 MEI1Q5TIA1 1274 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 KLHDC7AQ5VTJ3 777 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC55Q6ZSA7 311 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 C3orf67Q6ZVT6 689 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 DYMQ7RTS9 669 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF804AQ7Z570 1209 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 YTHDF3Q7Z739 585 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 VPS36Q86VN1 386 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC65Q8IXS2 484 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 CNPY4Q8N129 248 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ANKRD13CQ8N6S4 541 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 C3orf20Q8ND61 904 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 SH3RF3Q8TEJ3 882 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC15Q8TF66 581 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 HDAC7Q8WUI4 952 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 DDX12PQ92771 950 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 CELF1Q92879 486 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 HPS3Q969F9 1004 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ARL8AQ96BM9 186 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC45Q96CN5 670 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 MTMR8Q96EF0 704 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 DYNLL2Q96FJ2 89 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 EEF2KMTQ96G04 330 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 PBKQ96KB5 322 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 CABS1Q96KC9 395 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ATP6V1G3Q96LB4 118 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 NLRP3Q96P20 1036 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ZIM3Q96PE6 472 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 MYCBPQ99417 103 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 KRT12Q99456 494 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 EYA3Q99504 573 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 PAGR1Q9BTK6 254 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 MMTAG2Q9BU76 263 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 TLR10Q9BXR5 811 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 NT5C3AQ9H0P0 336 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 EPN3Q9H201 632 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 EPB41L5Q9HCM4 733 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 IL17RBQ9NRM6 502 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 BLOC1S4Q9NUP1 217 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 SMARCAL1Q9NZC9 954 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 BIN2Q9UBW5 565 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 SAP30BPQ9UHR5 308 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 DMGDHQ9UI17 866 aaKnown RBP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 GGA2Q9UJY4 613 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 NFU1Q9UMS0 254 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ATP6V0A2Q9Y487 856 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.87□□□□□ -1.79
COL8A1-204ENST00000462604 RREB1Q92766 1687 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 RGPD5Q99666 1765 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 NHSL1Q5SYE7 1610 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF233A6NK53 670 aa3.86□□□□□ -1.79
COL8A1-204ENST00000462604 PGRMC1O00264 195 aaKnown RBP3.86□□□□□ -1.79
COL8A1-204ENST00000462604 TRAF5O00463 557 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms