RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 GRIN2DO15399 1336 aa18.15■□□□□ 0.5
ERCC3-206ENST00000462306 ARVCFO00192 962 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 FIBPO43427 364 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 DTNBO60941 627 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 CDKL5O76039 1030 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 GGPS1O95749 300 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 MMP3P08254 477 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 MYL3P08590 195 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 SYN1P17600 705 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 ITGB5P18084 799 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 GNA11P29992 359 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 LAMC2Q13753 1193 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 BRDTQ58F21 947 aaPredicted RBP18.14■□□□□ 0.49
ERCC3-206ENST00000462306 JAKMIP3Q5VZ66 844 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 DHX37Q8IY37 1157 aaKnown RBP18.14■□□□□ 0.49
ERCC3-206ENST00000462306 CCDC148Q8NFR7 591 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 TOX2Q96NM4 488 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 BCAS3Q9H6U6 928 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 EHMT1Q9H9B1 1298 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 STK36Q9NRP7 1315 aa18.14■□□□□ 0.49
ERCC3-206ENST00000462306 KPNA6O60684 536 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 SREBF1P36956 1147 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 PSMC6P62333 389 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 ST3GAL1Q11201 340 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 ITGA7Q13683 1181 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 NLRX1Q86UT6 975 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 REXO1Q8N1G1 1221 aaKnown RBP18.13■□□□□ 0.49
ERCC3-206ENST00000462306 PPTC7Q8NI37 304 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 CRYGNQ8WXF5 182 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 GPRASP2Q96D09 838 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 MTG1Q9BT17 334 aaPredicted RBP18.13■□□□□ 0.49
ERCC3-206ENST00000462306 PDLIM7Q9NR12 457 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 PCDH10Q9P2E7 1040 aa18.13■□□□□ 0.49
ERCC3-206ENST00000462306 SORBS3O60504 671 aa18.12■□□□□ 0.49
ERCC3-206ENST00000462306 PQBP1O60828 265 aaKnown RBP18.12■□□□□ 0.49
ERCC3-206ENST00000462306 HOXD8P13378 290 aaPredicted RBP18.12■□□□□ 0.49
ERCC3-206ENST00000462306 HSDL1Q3SXM5 330 aa18.12■□□□□ 0.49
ERCC3-206ENST00000462306 MCTP2Q6DN12 878 aa18.12■□□□□ 0.49
ERCC3-206ENST00000462306 SH3RF1Q7Z6J0 888 aa18.12■□□□□ 0.49
ERCC3-206ENST00000462306 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
ERCC3-206ENST00000462306 RASGRP4Q8TDF6 673 aa18.12■□□□□ 0.49
ERCC3-206ENST00000462306 SENP7Q9BQF6 1050 aa18.12■□□□□ 0.49
ERCC3-206ENST00000462306 UPF2Q9HAU5 1272 aaKnown RBP18.12■□□□□ 0.49
ERCC3-206ENST00000462306 LIMCH1Q9UPQ0 1083 aa18.12■□□□□ 0.49
ERCC3-206ENST00000462306 TRIM43BA6NCK2 446 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 FDPSP14324 419 aaKnown RBP18.11■□□□□ 0.49
ERCC3-206ENST00000462306 NLRP5P59047 1200 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 FAAP100Q0VG06 881 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 NEDD9Q14511 834 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 RABEP1Q15276 862 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 NPY5RQ15761 445 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 FAM126BQ8IXS8 530 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 FAM177A1Q8N128 213 aaPredicted RBP18.11■□□□□ 0.49
ERCC3-206ENST00000462306 NSUN7Q8NE18 718 aaKnown RBP18.11■□□□□ 0.49
ERCC3-206ENST00000462306 CYP2W1Q8TAV3 490 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 TRIM43Q96BQ3 446 aaPredicted RBP18.11■□□□□ 0.49
ERCC3-206ENST00000462306 SPATA33Q96N06 139 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 TBC1D32Q96NH3 1257 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 MXRA8Q9BRK3 442 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 SEZ6LQ9BYH1 1024 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 MLXIPQ9HAP2 919 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 JADE2Q9NQC1 790 aa18.11■□□□□ 0.49
ERCC3-206ENST00000462306 SCN10AQ9Y5Y9 1956 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 MYH7BA7E2Y1 1941 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 MROH7Q68CQ1 1323 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 DCDC2CA8MYV0 355 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 MAFGO15525 162 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 ATP9AO75110 1047 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 CYP3A4P08684 503 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 CLTBP09497 229 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 KCNA2P16389 499 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 ARHGAP4P98171 946 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 MTMR1Q13613 665 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 DGKDQ16760 1214 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 METTL7BQ6UX53 244 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 CYFIP1Q7L576 1253 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 DAGLBQ8NCG7 672 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 KAT2BQ92831 832 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 CDHR1Q96JP9 859 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 GDF15Q99988 308 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 BACH2Q9BYV9 841 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 PRO3102Q9H379 93 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 ORC3Q9UBD5 711 aaPredicted RBP18.1■□□□□ 0.49
ERCC3-206ENST00000462306 PCDHA4Q9UN74 947 aa18.1■□□□□ 0.49
ERCC3-206ENST00000462306 M0R2N6 131 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 MEIS1O00470 390 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 PPFIA4O75335 1185 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 CD4P01730 458 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 NBPF20Q3BBV1 942 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 CEP55Q53EZ4 464 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 CHRDL2Q6WN34 429 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 PRDM5Q9NQX1 630 aaPredicted RBP18.09■□□□□ 0.49
ERCC3-206ENST00000462306 KCNH7Q9NS40 1196 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 COLQQ9Y215 455 aaPredicted RBP18.09■□□□□ 0.49
ERCC3-206ENST00000462306 TELO2Q9Y4R8 837 aa18.09■□□□□ 0.49
ERCC3-206ENST00000462306 KIAA0355O15063 1070 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 EDIL3O43854 480 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 JAK2O60674 1132 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 ARP10275 920 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 ITGB8P26012 769 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms