RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	GLT8D2	Q9H1C3	349 aa		9.59	□□□□□ -0.87
ITSN1-222	ENST00000462212	PRDM5	Q9NQX1	630 aa	Predicted RBP	9.59	□□□□□ -0.87
ITSN1-222	ENST00000462212	PDRG1	Q9NUG6	133 aa		9.59	□□□□□ -0.87
ITSN1-222	ENST00000462212	NAP1L2	Q9ULW6	460 aa	Predicted RBP	9.59	□□□□□ -0.87
ITSN1-222	ENST00000462212	SMCO2	A6NFE2	343 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	SPDYE3	A6NKU9	549 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	FIBP	O43427	364 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	MYL3	P08590	195 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	CLK2	P49760	499 aa	Known RBP	9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	FXR1	P51114	621 aa	Known RBP eCLIP	9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	PSMC6	P62333	389 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	GNPTAB	Q3T906	1256 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	C8orf34	Q49A92	452 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	NFRKB	Q6P4R8	1299 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	KAT2B	Q92831	832 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	PHKB	Q93100	1093 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	ZFP91	Q96JP5	570 aa	Predicted RBP	9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	LBHD1	Q9BQE6	289 aa	Predicted RBP	9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	SENP7	Q9BQF6	1050 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	ZMYND12	Q9H0C1	365 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	NCOA5	Q9HCD5	579 aa	Known RBP	9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	TMEM39A	Q9NV64	488 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	PCDHA6	Q9UN73	950 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	PCDHA8	Q9Y5H6	950 aa		9.58	□□□□□ -0.88
ITSN1-222	ENST00000462212	TLR3	O15455	904 aa	Known RBP	9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	PPFIA4	O75335	1185 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	GGPS1	O95749	300 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	F2	P00734	622 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	TIMP1	P01033	207 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	FOS	P01100	380 aa	Predicted RBP	9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	RAG1	P15918	1043 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	ITGB5	P18084	799 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	ADCY7	P51828	1080 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	CCT2	P78371	535 aa	Known RBP	9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	PTPN11	Q06124	597 aa	Predicted RBP	9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	AP3B2	Q13367	1082 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	NEDD9	Q14511	834 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	DGKD	Q16760	1214 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	NBPF20	Q3BBV1	942 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	HSDL1	Q3SXM5	330 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	SESTD1	Q86VW0	696 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	DHX37	Q8IY37	1157 aa	Known RBP	9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	TDH	Q8IZJ6	230 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	BAD	Q92934	168 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	GPRASP2	Q96D09	838 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	LARP6	Q9BRS8	491 aa	Known RBP	9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	UBE2O	Q9C0C9	1292 aa	Known RBP	9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	RTEL1	Q9NZ71	1219 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	UBIAD1	Q9Y5Z9	338 aa		9.57	□□□□□ -0.88
ITSN1-222	ENST00000462212	HAS3	O00219	553 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	MAFG	O15525	162 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	B4GALT4	O60513	344 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	KCNA2	P16389	499 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	SREBF1	P36956	1147 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	AKAP17A	Q02040	695 aa	Known RBP	9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	LRIT3	Q3SXY7	679 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	MFSD5	Q6N075	450 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	METTL7B	Q6UX53	244 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	NLRX1	Q86UT6	975 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	CCDC12	Q8WUD4	166 aa	Predicted RBP	9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	CRYGN	Q8WXF5	182 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	CDHR1	Q96JP9	859 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	SPATA33	Q96N06	139 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	NOC4L	Q9BVI4	516 aa	Known RBP	9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	SLC26A6	Q9BXS9	759 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	ANO3	Q9BYT9	981 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	TRPV6	Q9H1D0	765 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	BCAS3	Q9H6U6	928 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	EHMT1	Q9H9B1	1298 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	SH3GLB2	Q9NR46	395 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	TPCN1	Q9ULQ1	816 aa		9.56	□□□□□ -0.88
ITSN1-222	ENST00000462212	DOCK5	Q9H7D0	1870 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	ADAMTS3	O15072	1205 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	PFKFB2	O60825	505 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	ATP9A	O75110	1047 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	PPFIA3	O75145	1194 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	DEXI	O95424	95 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	SUPT20HL2	P0C7V6	817 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	GNA11	P29992	359 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	EPHB4	P54760	987 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	AK2	P54819	239 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	FPGS	Q05932	587 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	SSRP1	Q08945	709 aa	Known RBP	9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	SCRN1	Q12765	414 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	ANKRD1	Q15327	319 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	MCTP2	Q6DN12	878 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	CYFIP1	Q7L576	1253 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	TRIM22	Q8IYM9	498 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	FAM177A1	Q8N128	213 aa	Predicted RBP	9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	GIMAP8	Q8ND71	665 aa	Predicted RBP	9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	CCDC148	Q8NFR7	591 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	PGBD1	Q96JS3	809 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	CTAGE1	Q96RT6	745 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	GPR20	Q99678	358 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	MXRA8	Q9BRK3	442 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	C16orf70	Q9BSU1	422 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	KATNAL1	Q9BW62	490 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	MLXIP	Q9HAP2	919 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	C6orf50	Q9HD87	102 aa		9.55	□□□□□ -0.88
ITSN1-222	ENST00000462212	JADE2	Q9NQC1	790 aa		9.55	□□□□□ -0.88

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms