RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 GNA11P29992 359 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 HNRNPH1P31943 449 aaKnown RBP20.35■□□□□ 0.85
HPS3-204ENST00000462030 CDK5RAP3Q96JB5 506 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 MTMR9Q96QG7 549 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 STK17AQ9UEE5 414 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 SAP30BPQ9UHR5 308 aaKnown RBP20.35■□□□□ 0.85
HPS3-204ENST00000462030 LSP1P33241 339 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 RPS8P62241 208 aaKnown RBP20.35■□□□□ 0.85
HPS3-204ENST00000462030 IRX3P78415 501 aaPredicted RBP20.35■□□□□ 0.85
HPS3-204ENST00000462030 SF3B2Q13435 895 aaKnown RBP20.35■□□□□ 0.85
HPS3-204ENST00000462030 DIXDC1Q155Q3 683 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 CALCRLQ16602 461 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 SLC9C1Q4G0N8 1177 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 TGFBRAP1Q8WUH2 860 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 DDX12PQ92771 950 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 PIGSQ96S52 555 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 LZTS2Q9BRK4 669 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 NAV1Q8NEY1 1877 aa20.35■□□□□ 0.85
HPS3-204ENST00000462030 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 SFMBT2Q5VUG0 894 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 MCTP2Q6DN12 878 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 REXO1Q8N1G1 1221 aaKnown RBP20.34■□□□□ 0.85
HPS3-204ENST00000462030 RAD54LQ92698 747 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 YY1AP1Q9H869 796 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 CEP72Q9P209 647 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 RNF14Q9UBS8 474 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 ROBO1Q9Y6N7 1651 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 A6NNZ2 444 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 TDP2O95551 362 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 TUBB8Q3ZCM7 444 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 FAM83BQ5T0W9 1011 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 INPP4AQ96PE3 977 aaPredicted RBP20.34■□□□□ 0.85
HPS3-204ENST00000462030 LSM14BQ9BX40 385 aaKnown RBP20.34■□□□□ 0.85
HPS3-204ENST00000462030 PACSIN1Q9BY11 444 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 EDEM3Q9BZQ6 932 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 KANSL2Q9H9L4 492 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 CAPN7Q9Y6W3 813 aa20.34■□□□□ 0.85
HPS3-204ENST00000462030 NR1D1P20393 614 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 EHHADHQ08426 723 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 NAB2Q15742 525 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 GRIK5Q16478 980 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 B4GALNT4Q76KP1 1039 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 MREGQ8N565 214 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 TBC1D5Q92609 795 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 TSG101Q99816 390 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 WNK3Q9BYP7 1800 aa20.33■□□□□ 0.85
HPS3-204ENST00000462030 SERPING1P05155 500 aa20.33■□□□□ 0.84
HPS3-204ENST00000462030 POLR2FP61218 127 aaKnown RBP20.33■□□□□ 0.84
HPS3-204ENST00000462030 ENOX2Q16206 610 aaKnown RBP20.33■□□□□ 0.84
HPS3-204ENST00000462030 MEI1Q5TIA1 1274 aa20.33■□□□□ 0.84
HPS3-204ENST00000462030 NAA35Q5VZE5 725 aa20.33■□□□□ 0.84
HPS3-204ENST00000462030 SLC51AQ86UW1 340 aa20.33■□□□□ 0.84
HPS3-204ENST00000462030 MAPKAPK5Q8IW41 473 aa20.33■□□□□ 0.84
HPS3-204ENST00000462030 SNX29Q8TEQ0 813 aa20.33■□□□□ 0.84
HPS3-204ENST00000462030 RAD51CO43502 376 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 EDIL3O43854 480 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 FXR2P51116 673 aaKnown RBP eCLIP20.32■□□□□ 0.84
HPS3-204ENST00000462030 ARID5AQ03989 594 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 CCDC40Q4G0X9 1142 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 CLEC4GQ6UXB4 293 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 CNPY4Q8N129 248 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 EPN3Q9H201 632 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 SEC63Q9UGP8 760 aaKnown RBP20.32■□□□□ 0.84
HPS3-204ENST00000462030 COL4A3BPQ9Y5P4 624 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 SNED1Q8TER0 1413 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 ZCWPW2Q504Y3 356 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 CD302Q8IX05 232 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 FGFBP2Q9BYJ0 223 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 UBA5Q9GZZ9 404 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 ATP6V0A2Q9Y487 856 aa20.32■□□□□ 0.84
HPS3-204ENST00000462030 ATXN2Q99700 1313 aaKnown RBP20.31■□□□□ 0.84
HPS3-204ENST00000462030 A0A087X0T9 212 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 MYO1FO00160 1098 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 TRAF5O00463 557 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 MEFVO15553 781 aaPredicted RBP20.31■□□□□ 0.84
HPS3-204ENST00000462030 FAM228BP0C875 321 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 FNTAP49354 379 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 SEC24CP53992 1094 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 ECM1Q16610 540 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 KLHL7Q8IXQ5 586 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 MYOCDQ8IZQ8 938 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 ATP6V1G3Q96LB4 118 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 RIC8AQ9NPQ8 531 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 PCDHGC5Q9Y5F6 944 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 MYH4Q9Y623 1939 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 COL14A1Q05707 1796 aaKnown RBP20.31■□□□□ 0.84
HPS3-204ENST00000462030 GRID2IPA4D2P6 1211 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 PPP1R37O75864 691 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 KIAA0754O94854 1291 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 LDHBP07195 334 aaKnown RBP20.31■□□□□ 0.84
HPS3-204ENST00000462030 RAPGEF1Q13905 1077 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 PTGISQ16647 500 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 TMEM266Q2M3C6 531 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 SPTY2D1Q68D10 685 aaPredicted RBP20.31■□□□□ 0.84
HPS3-204ENST00000462030 OTUD6BQ8N6M0 293 aa20.31■□□□□ 0.84
HPS3-204ENST00000462030 PRPF38AQ8NAV1 312 aaKnown RBP20.31■□□□□ 0.84
HPS3-204ENST00000462030 ZNF473Q8WTR7 871 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms