RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 XBP1P17861 261 aa11.89□□□□□ -0.51
SCNM1-204ENST00000461862 UBE2HP62256 183 aa11.89□□□□□ -0.51
SCNM1-204ENST00000461862 GRM4Q14833 912 aa11.89□□□□□ -0.51
SCNM1-204ENST00000461862 SYT9Q86SS6 491 aa11.89□□□□□ -0.51
SCNM1-204ENST00000461862 USP48Q86UV5 1035 aa11.89□□□□□ -0.51
SCNM1-204ENST00000461862 METTL16Q86W50 562 aaKnown RBP11.89□□□□□ -0.51
SCNM1-204ENST00000461862 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-204ENST00000461862 LZTS2Q9BRK4 669 aa11.89□□□□□ -0.51
SCNM1-204ENST00000461862 C2orf49Q9BVC5 232 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-204ENST00000461862 SHMT1P34896 483 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 C1QTNF8P60827 252 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 KIF23Q02241 960 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 SAFBQ15424 915 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 NBPF9Q3BBW0 867 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 FOXD4L6Q3SYB3 417 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 FOXD4L3Q6VB84 417 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 SCG3Q8WXD2 468 aaKnown RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 CEP95Q96GE4 821 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 CHAMP1Q96JM3 812 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 PRMT6Q96LA8 375 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 TMEM47Q9BQJ4 181 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 TDRD3Q9H7E2 651 aaKnown RBP11.88□□□□□ -0.51
SCNM1-204ENST00000461862 NEUROD4Q9HD90 331 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 STX8Q9UNK0 236 aa11.88□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L15C9J2P7 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L10C9JJH3 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L13C9JLJ4 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 ADM5C9JUS6 153 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L11C9JVI0 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L18D6R9N7 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L22D6RA61 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L17D6RBQ6 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L19D6RCP7 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L20D6RJB6 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 MYO1BO43795 1136 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 LGR5O75473 907 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 LMOD1P29536 600 aaPredicted RBP11.87□□□□□ -0.51
SCNM1-204ENST00000461862 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
SCNM1-204ENST00000461862 GUCY1B3Q02153 619 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 TYRO3Q06418 890 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 USP17L24Q0WX57 530 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 DPYDQ12882 1025 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 KRT40Q6A162 431 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 ZSCAN29Q8IWY8 852 aaPredicted RBP11.87□□□□□ -0.51
SCNM1-204ENST00000461862 ALDH16A1Q8IZ83 802 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 GPT2Q8TD30 523 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 FAM151AQ8WW52 585 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
SCNM1-204ENST00000461862 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 ADARB2Q9NS39 739 aaKnown RBP11.87□□□□□ -0.51
SCNM1-204ENST00000461862 MTMR4Q9NYA4 1195 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 HERC5Q9UII4 1024 aaKnown RBP11.87□□□□□ -0.51
SCNM1-204ENST00000461862 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
SCNM1-204ENST00000461862 SCN4AP35499 1836 aa11.87□□□□□ -0.51
SCNM1-204ENST00000461862 TOMM70O94826 608 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 PLEKHA8P1O95397 391 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 TTLL1O95922 423 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 MMP1P03956 469 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 AKR1B1P15121 316 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 SMARCA1P28370 1054 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 CACNB3P54284 484 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 TCP10Q12799 353 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 KIF4BQ2VIQ3 1234 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 PRAMEF18Q5VWM3 479 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 TATDN1Q6P1N9 297 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 FAM83AQ86UY5 434 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 ALYREFQ86V81 257 aaKnown RBP11.86□□□□□ -0.51
SCNM1-204ENST00000461862 ZFPM1Q8IX07 1006 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
SCNM1-204ENST00000461862 DPF2Q92785 391 aa11.86□□□□□ -0.51
SCNM1-204ENST00000461862 ZNF70Q9UC06 446 aaPredicted RBP11.86□□□□□ -0.51
SCNM1-204ENST00000461862 CLRN2A0PK11 232 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 IQCA1LA6NCM1 817 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 DDTLA6NHG4 134 aaPredicted RBP11.85□□□□□ -0.51
SCNM1-204ENST00000461862 YEATS4O95619 227 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.51
SCNM1-204ENST00000461862 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
SCNM1-204ENST00000461862 CERKLQ49MI3 558 aaPredicted RBP11.85□□□□□ -0.51
SCNM1-204ENST00000461862 ASPRV1Q53RT3 343 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 TMEM179Q6ZVK1 233 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 SRBD1Q8N5C6 995 aaKnown RBP11.85□□□□□ -0.51
SCNM1-204ENST00000461862 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 FOXP1Q9H334 677 aaPredicted RBP11.85□□□□□ -0.51
SCNM1-204ENST00000461862 DNAJC18Q9H819 358 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 MYOZ2Q9NPC6 264 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 BRD7Q9NPI1 651 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 GGA3Q9NZ52 723 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 MAD2L2Q9UI95 211 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 SYNPO2Q9UMS6 1093 aa11.85□□□□□ -0.51
SCNM1-204ENST00000461862 CNTNAP1P78357 1384 aa11.84□□□□□ -0.51
SCNM1-204ENST00000461862 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
SCNM1-204ENST00000461862 ELOA3DA6NLF2 546 aaPredicted RBP11.84□□□□□ -0.51
SCNM1-204ENST00000461862 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms