RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 RSPH10BP0C881 870 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 ZP2Q05996 745 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 LAMC2Q13753 1193 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.16
PABPC4-208ENST00000461578 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 SP7Q8TDD2 431 aaPredicted RBP16.08■□□□□ 0.16
PABPC4-208ENST00000461578 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.16
PABPC4-208ENST00000461578 PABPC5Q96DU9 382 aaKnown RBP16.08■□□□□ 0.16
PABPC4-208ENST00000461578 TTC14Q96N46 770 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 HELLSQ9NRZ9 838 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 CLDND1Q9NY35 253 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 EMSYQ7Z589 1322 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 NLRC5Q86WI3 1866 aa16.08■□□□□ 0.16
PABPC4-208ENST00000461578 POTEB3A0JP26 581 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 H3BNC9 293 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
PABPC4-208ENST00000461578 NR3C2P08235 984 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
PABPC4-208ENST00000461578 POTEBQ6S5H4 581 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 TBC1D10CQ8IV04 446 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 TMEM192Q8IY95 271 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 SAMD11Q96NU1 681 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 NSUN3Q9H649 340 aaKnown RBP16.07■□□□□ 0.16
PABPC4-208ENST00000461578 FAM50BQ9Y247 325 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 MYH6P13533 1939 aa16.07■□□□□ 0.16
PABPC4-208ENST00000461578 NEDD4P46934 1319 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 EIF3JO75822 258 aaKnown RBP16.06■□□□□ 0.16
PABPC4-208ENST00000461578 CSPG5O95196 566 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 CFBP00751 764 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 CTSHP09668 335 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 HSPD1P10809 573 aaKnown RBP16.06■□□□□ 0.16
PABPC4-208ENST00000461578 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
PABPC4-208ENST00000461578 CLUL1Q15846 466 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 QRICH1Q2TAL8 776 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 PLEKHG4Q58EX7 1191 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 HFE2Q6ZVN8 426 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 ZNF589Q86UQ0 364 aaPredicted RBP16.06■□□□□ 0.16
PABPC4-208ENST00000461578 SERINC5Q86VE9 423 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 FBXO11Q86XK2 927 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 EVI5LQ96CN4 794 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 SPATA33Q96N06 139 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 OSBPL7Q9BZF2 842 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 VAT1LQ9HCJ6 419 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
PABPC4-208ENST00000461578 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
PABPC4-208ENST00000461578 GGPS1O95749 300 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 HSDL1Q3SXM5 330 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 MCMDC2Q4G0Z9 681 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 RPAINQ86UA6 219 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 ADHFE1Q8IWW8 467 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 PNMA1Q8ND90 353 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 SEPT8Q92599 483 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 TOP1MTQ969P6 601 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 ZFP91Q96JP5 570 aaPredicted RBP16.05■□□□□ 0.16
PABPC4-208ENST00000461578 PRKAG3Q9UGI9 489 aa16.05■□□□□ 0.16
PABPC4-208ENST00000461578 WDFY4Q6ZS81 3184 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 ATG2AQ2TAZ0 1938 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 SALL3Q9BXA9 1300 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 C17orf102A2RUQ5 167 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 C19orf67A6NJJ6 358 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 IRS1P35568 1242 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 MYSM1Q5VVJ2 828 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 ESR2Q92731 530 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 IFIH1Q9BYX4 1025 aaKnown RBP16.04■□□□□ 0.16
PABPC4-208ENST00000461578 KAT14Q9H8E8 782 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 MUTYHQ9UIF7 546 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 PCDHB15Q9Y5E8 787 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 MYO7AQ13402 2215 aa16.04■□□□□ 0.16
PABPC4-208ENST00000461578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.03■□□□□ 0.16
PABPC4-208ENST00000461578 TREHO43280 583 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 RGS20O76081 388 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 HOXD8P13378 290 aaPredicted RBP16.03■□□□□ 0.16
PABPC4-208ENST00000461578 CTNNB1P35222 781 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 SP2Q02086 613 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 NMIQ13287 307 aaPredicted RBP16.03■□□□□ 0.16
PABPC4-208ENST00000461578 CELF3Q5SZQ8 465 aaKnown RBP16.03■□□□□ 0.16
PABPC4-208ENST00000461578 DGKHQ86XP1 1220 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 GPKOWQ92917 476 aaPredicted RBP eCLIP16.03■□□□□ 0.161e-7■□□□□ 9.9
PABPC4-208ENST00000461578 C16orf70Q9BSU1 422 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 UPF3BQ9BZI7 483 aaKnown RBP16.03■□□□□ 0.16
PABPC4-208ENST00000461578 MAF1Q9H063 256 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 KCNH6Q9H252 994 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 RALGAPA2Q2PPJ7 1873 aa16.03■□□□□ 0.16
PABPC4-208ENST00000461578 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 SMIM10L2AP0DMW4 78 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 SMIM10L2BP0DMW5 78 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.16
PABPC4-208ENST00000461578 LTBRP36941 435 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 DLX2Q07687 328 aaPredicted RBP16.02■□□□□ 0.16
PABPC4-208ENST00000461578 COL19A1Q14993 1142 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 PHOX2BQ99453 314 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 RNF41Q9H4P4 317 aaPredicted RBP16.02■□□□□ 0.16
PABPC4-208ENST00000461578 JMJD4Q9H9V9 463 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 MLXIPQ9HAP2 919 aa16.02■□□□□ 0.16
PABPC4-208ENST00000461578 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms