RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 SH3GLB2Q9NR46 395 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 TMEM260Q9NX78 707 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 LIMCH1Q9UPQ0 1083 aa12.11□□□□□ -0.47
TRAPPC12-213ENST00000461577 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 SPATA31C2B4DYI2 1134 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 ARVCFO00192 962 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 TLR3O15455 904 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 PQBP1O60828 265 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 LARGE1O95461 756 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 MMP3P08254 477 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 XBP1P17861 261 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 ZNF76P36508 570 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 TLE2Q04725 743 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 NEDD9Q14511 834 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 CELF3Q5SZQ8 465 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 WASF1Q92558 559 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 CDHR1Q96JP9 859 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 SEZ6LQ9BYH1 1024 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 ORC3Q9UBD5 711 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 STK36Q9NRP7 1315 aa12.1□□□□□ -0.47
TRAPPC12-213ENST00000461577 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 CHMP4BP1P59074 171 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 PSMC6P62333 389 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 PURAQ00577 322 aaKnown RBP12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 SP2Q02086 613 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 ITGA7Q13683 1181 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 RABEP1Q15276 862 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 DGKDQ16760 1214 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 GIMAP8Q8ND71 665 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 PPTC7Q8NI37 304 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 GPRASP2Q96D09 838 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 ZSCAN31Q96LW9 406 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 SPATA33Q96N06 139 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 KIF2CQ99661 725 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 JADE2Q9NQC1 790 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 UBIAD1Q9Y5Z9 338 aa12.09□□□□□ -0.47
TRAPPC12-213ENST00000461577 NOP56O00567 594 aaKnown RBP12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 ST18O60284 1047 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 CLTBP09497 229 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 SREBF1P36956 1147 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 CDK7P50613 346 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 ARHGAP4P98171 946 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 SEMA3FQ13275 785 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 MTMR1Q13613 665 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 FAM47CQ5HY64 1035 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 CYFIP1Q7L576 1253 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 ANKRD33Q7Z3H0 272 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 FAM177A1Q8N128 213 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 RASGRP4Q8TDF6 673 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 TOX2Q96NM4 488 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 AIFM3Q96NN9 605 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 LBHD1Q9BQE6 289 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 SENP7Q9BQF6 1050 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 MXRA8Q9BRK3 442 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 PCDHA4Q9UN74 947 aa12.08□□□□□ -0.48
TRAPPC12-213ENST00000461577 MAFGO15525 162 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 DTNBO60941 627 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 CTDNEP1O95476 244 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 ITGB5P18084 799 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 CEP55Q53EZ4 464 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 GALNT17Q6IS24 598 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 METTL7BQ6UX53 244 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 CCDC83Q8IWF9 413 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 BLIDQ8IZY5 108 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 SLC43A3Q8NBI5 491 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 NSUN7Q8NE18 718 aaKnown RBP12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 IL27Q8NEV9 243 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 ALG1Q9BT22 464 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 KATNAL1Q9BW62 490 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 PDLIM7Q9NR12 457 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 SH2B1Q9NRF2 756 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 PKD2L1Q9P0L9 805 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 GRIN2DO15399 1336 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
TRAPPC12-213ENST00000461577 ADAMTS3O15072 1205 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 PPFIA4O75335 1185 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 CYP3A4P08684 503 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 KCNA2P16389 499 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 MAGEA10P43363 369 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 PSEN2P49810 448 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 SP4Q02446 784 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 FAAP100Q0VG06 881 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 NFRKBQ6P4R8 1299 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 FAM126BQ8IXS8 530 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 DAGLBQ8NCG7 672 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 TBC1D32Q96NH3 1257 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms