RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 SMCR8Q8TEV9 937 aaPredicted RBP8.36□□□□□ -1.07
LSG1-205ENST00000461343 NOC3LQ8WTT2 800 aaKnown RBP8.36□□□□□ -1.07
LSG1-205ENST00000461343 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 LARP4BQ92615 738 aaKnown RBP8.36□□□□□ -1.07
LSG1-205ENST00000461343 SLC5A5Q92911 643 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 CTAGE1Q96RT6 745 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 TIPINQ9BVW5 301 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 SPATC1LQ9H0A9 340 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 TMEM60Q9H2L4 133 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 JADE2Q9NQC1 790 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 EXOC1Q9NV70 894 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 ZNF214Q9UL59 606 aaPredicted RBP8.36□□□□□ -1.07
LSG1-205ENST00000461343 PCDHA5Q9Y5H7 936 aa8.36□□□□□ -1.07
LSG1-205ENST00000461343 MYH7BA7E2Y1 1941 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 MANSC4A6NHS7 340 aaPredicted RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 IPO5O00410 1097 aaKnown RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 OPLAHO14841 1288 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 STRNO43815 780 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 SLC37A4O43826 429 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 CELF2O95319 508 aaKnown RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 RPN1P04843 607 aaKnown RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 TGFB3P10600 412 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 XRCC6P12956 609 aaKnown RBP eCLIP8.35□□□□□ -1.07
LSG1-205ENST00000461343 PLCG1P19174 1290 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 SARSP49591 514 aaKnown RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 DPYDQ12882 1025 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 TMEM132BQ14DG7 1078 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 KARSQ15046 597 aaKnown RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 STXBP2Q15833 593 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 TPD52L1Q16890 204 aaPredicted RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 TMEM119Q4V9L6 283 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 COBLL1Q53SF7 1204 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 SPECC1Q5M775 1068 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 ZNF658Q5TYW1 1059 aaPredicted RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 SARM1Q6SZW1 724 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 GAS2L3Q86XJ1 694 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 FAM114A1Q8IWE2 563 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 CCDC65Q8IXS2 484 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 EXOC8Q8IYI6 725 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 REPS2Q8NFH8 660 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 RAD54LQ92698 747 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 HAS1Q92839 578 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 CCDC43Q96MW1 224 aaKnown RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 C7orf25Q9BPX7 421 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 ASCC2Q9H1I8 757 aaPredicted RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 RBSNQ9H1K0 784 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 DNAJC25Q9H1X3 360 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 RRAGCQ9HB90 399 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 PXMP2Q9NR77 195 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 HOMER2Q9NSB8 354 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 CYP39A1Q9NYL5 469 aa8.35□□□□□ -1.07
LSG1-205ENST00000461343 SCAF8Q9UPN6 1271 aaKnown RBP8.35□□□□□ -1.07
LSG1-205ENST00000461343 NFASCO94856 1347 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 OTOFQ9HC10 1997 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 IGLV3-22A0A075B6J6 115 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 ASB14A6NK59 587 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 POTECB2RU33 542 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 FAM86B1E9PN63 330 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 POTEB2H3BUK9 544 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 NFIBO00712 420 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 MSH4O15457 936 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 EIF3JO75822 258 aaKnown RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 RHOBTB3O94955 611 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 KRT18P05783 430 aaKnown RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 HOXC6P09630 235 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 FAM86B2P0C5J1 330 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 FCER1AP12319 257 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 GAP43P17677 238 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 SNAP25P60880 206 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 SREBF2Q12772 1141 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 PNOCQ13519 176 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 IRF5Q13568 498 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 MORC3Q14149 939 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 PGM5Q15124 567 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 EPHA7Q15375 998 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 FILIP1LQ4L180 1135 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 NOM1Q5C9Z4 860 aaKnown RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 MAP1SQ66K74 1059 aaPredicted RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 ZNF746Q6NUN9 644 aaPredicted RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 VSIG10LQ86VR7 867 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 RNF214Q8ND24 703 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 GPRC5AQ8NFJ5 357 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 ENOX1Q8TC92 643 aaKnown RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 ATP6V0A1Q93050 837 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 CCDC102AQ96A19 550 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 DHTKD1Q96HY7 919 aaPredicted RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 WNK4Q96J92 1243 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 HHIPL1Q96JK4 782 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 PPP1R9BQ96SB3 815 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 PDCD2LQ9BRP1 358 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 ZSWIM4Q9H7M6 989 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 ZNF408Q9H9D4 720 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
LSG1-205ENST00000461343 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.34□□□□□ -1.07
LSG1-205ENST00000461343 SEL1LQ9UBV2 794 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms