RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 RPTORQ8N122 1335 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
IFT88-204ENST00000461115 FAM86B1E9PN63 330 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 RAD21O60216 631 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 SERPINC1P01008 464 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 FAM86B2P0C5J1 330 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 LRMPQ12912 555 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 PSMD2Q13200 908 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 USH1GQ495M9 461 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 NBPF12Q5TAG4 269 aaPredicted RBP12.18□□□□□ -0.46
IFT88-204ENST00000461115 ARMCX5Q6P1M9 558 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 LDHDQ86WU2 507 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 TRMT44Q8IYL2 757 aaKnown RBP12.18□□□□□ -0.46
IFT88-204ENST00000461115 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
IFT88-204ENST00000461115 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 SLF1Q9BQI6 1058 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 SLC38A10Q9HBR0 1119 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
IFT88-204ENST00000461115 ADD3Q9UEY8 706 aaKnown RBP12.18□□□□□ -0.46
IFT88-204ENST00000461115 COL11A1P12107 1806 aaPredicted RBP12.18□□□□□ -0.46
IFT88-204ENST00000461115 SSC5DA1L4H1 1573 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 WDR90Q96KV7 1748 aa12.18□□□□□ -0.46
IFT88-204ENST00000461115 MYMKA6NI61 221 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 GCOM1H8Y6P7 765 aaPredicted RBP12.17□□□□□ -0.46
IFT88-204ENST00000461115 POLR2MP0CAP2 368 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 MUTP22033 750 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 RPA1P27694 616 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 SNAP25P60880 206 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 ECM1Q16610 540 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 TTI2Q6NXR4 508 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 B3GNT9Q6UX72 402 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 TMC6Q7Z403 805 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 RASSF8Q8NHQ8 419 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 NOC3LQ8WTT2 800 aaKnown RBP12.17□□□□□ -0.46
IFT88-204ENST00000461115 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
IFT88-204ENST00000461115 DNAJC19Q96DA6 116 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 POLR3CQ9BUI4 534 aaPredicted RBP12.17□□□□□ -0.46
IFT88-204ENST00000461115 EMILIN3Q9NT22 766 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 FBXO28Q9NVF7 368 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 VAV3Q9UKW4 847 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 PPP1R9AQ9ULJ8 1098 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 ADAMTS5Q9UNA0 930 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 GDAQ9Y2T3 454 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 GJA3Q9Y6H8 435 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 ITIH6Q6UXX5 1313 aa12.17□□□□□ -0.46
IFT88-204ENST00000461115 FRMD3A2A2Y4 597 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 C19orf81C9J6K1 198 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 PSMA7O14818 248 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 MSH4O15457 936 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 BCRP11274 1271 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 CCNE1P24864 410 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
IFT88-204ENST00000461115 STIM1Q13586 685 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 ANGEL2Q5VTE6 544 aaKnown RBP12.16□□□□□ -0.46
IFT88-204ENST00000461115 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 CENPPQ6IPU0 288 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 NIPA1Q7RTP0 329 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 KCNK18Q7Z418 384 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 FILIP1Q7Z7B0 1213 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 IRF2BP1Q8IU81 584 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 NELFBQ8WX92 580 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 CLEC4DQ8WXI8 215 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 SLC5A5Q92911 643 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 KIFC2Q96AC6 838 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 KLRG1Q96E93 195 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 THAP9Q9H5L6 903 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 EHMT1Q9H9B1 1298 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 AS3MTQ9HBK9 375 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 CTNND2Q9UQB3 1225 aa12.16□□□□□ -0.46
IFT88-204ENST00000461115 MEIS1O00470 390 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 SPATA31C1P0DKV0 1188 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
IFT88-204ENST00000461115 PTPRAP18433 802 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 CDK11BP21127 795 aaKnown RBP12.15□□□□□ -0.46
IFT88-204ENST00000461115 EEF1GP26641 437 aaKnown RBP12.15□□□□□ -0.46
IFT88-204ENST00000461115 OAZ1P54368 228 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 BACE1P56817 501 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 PDE4DQ08499 809 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 STK4Q13043 487 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 PPP2R5CQ13362 524 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 MCM6Q14566 821 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 ARID5BQ14865 1188 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 PRR16Q569H4 304 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 SPECC1LQ69YQ0 1117 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 GUF1Q8N442 669 aaKnown RBP12.15□□□□□ -0.46
IFT88-204ENST00000461115 ZNF280CQ8ND82 737 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 TBC1D5Q92609 795 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 CDK5RAP3Q96JB5 506 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 WDR81Q562E7 1941 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 MYPNQ86TC9 1320 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 OTOFQ9HC10 1997 aa12.15□□□□□ -0.46
IFT88-204ENST00000461115 BICDL2A1A5D9 508 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 ATP2A1O14983 1001 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 PSMD10O75832 226 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 SKILP12757 684 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 VCAM1P19320 739 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 FECHP22830 423 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms