RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 STAT2P52630 851 aa16.12■□□□□ 0.17
PTPRU-205ENST00000460170 USP17L5A8MUK1 530 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 PGRMC1O00264 195 aaKnown RBP16.11■□□□□ 0.17
PTPRU-205ENST00000460170 RNF40O75150 1001 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 MFAP3P55082 362 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 GRM4Q14833 912 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 FOXP4Q8IVH2 680 aaPredicted RBP16.11■□□□□ 0.17
PTPRU-205ENST00000460170 IGDCC4Q8TDY8 1250 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 NT5C1BQ96P26 610 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 CD209Q9NNX6 404 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 SF3A3Q12874 501 aaKnown RBP eCLIP16.11■□□□□ 0.17
PTPRU-205ENST00000460170 MESDQ14696 234 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 CFAP157Q5JU67 520 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 KCTD16Q68DU8 428 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 PNMA8AQ86V59 439 aaPredicted RBP16.11■□□□□ 0.17
PTPRU-205ENST00000460170 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
PTPRU-205ENST00000460170 RAB20Q9NX57 234 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 GCNT4Q9P109 453 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 ATP11AP98196 1134 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 C10orf76Q5T2E6 689 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 CACNA2D3Q8IZS8 1091 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 ANKRD42Q8N9B4 389 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 SLC17A8Q8NDX2 589 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 TRIM6Q9C030 488 aaPredicted RBP16.11■□□□□ 0.17
PTPRU-205ENST00000460170 QTRT2Q9H974 415 aaKnown RBP16.11■□□□□ 0.17
PTPRU-205ENST00000460170 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 GBP1P32455 592 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 STX2P32856 288 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 ZBTB8OSQ8IWT0 167 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 RSRC1Q96IZ7 334 aaKnown RBP16.11■□□□□ 0.17
PTPRU-205ENST00000460170 PARVGQ9HBI0 331 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 AGLP35573 1532 aa16.11■□□□□ 0.17
PTPRU-205ENST00000460170 TEX33O43247 280 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 NSFP46459 744 aaKnown RBP16.1■□□□□ 0.17
PTPRU-205ENST00000460170 MGARPQ8TDB4 240 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
PTPRU-205ENST00000460170 FBXO2Q9UK22 296 aaPredicted RBP16.1■□□□□ 0.17
PTPRU-205ENST00000460170 TECPR2O15040 1411 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 HNRNPDLO14979 420 aaKnown RBP16.1■□□□□ 0.17
PTPRU-205ENST00000460170 ATP2C1P98194 919 aaPredicted RBP16.1■□□□□ 0.17
PTPRU-205ENST00000460170 CASP8Q14790 479 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 MAGOHBQ96A72 148 aaKnown RBP16.1■□□□□ 0.17
PTPRU-205ENST00000460170 ACCSQ96QU6 501 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 ABCB6Q9NP58 842 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 PTK2Q05397 1052 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 LGSNQ5TDP6 509 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 SPATS2Q86XZ4 545 aaKnown RBP16.1■□□□□ 0.17
PTPRU-205ENST00000460170 GFPT2O94808 682 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 P4HA1P13674 534 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 BPIFB4P59827 614 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 IRX5P78411 483 aaPredicted RBP16.1■□□□□ 0.17
PTPRU-205ENST00000460170 KCNF1Q9H3M0 494 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 FAM114A2Q9NRY5 505 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 ADAMTS1Q9UHI8 967 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 PASKQ96RG2 1323 aa16.1■□□□□ 0.17
PTPRU-205ENST00000460170 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 POTEMA6NI47 508 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 POLGP54098 1239 aaPredicted RBP16.09■□□□□ 0.17
PTPRU-205ENST00000460170 P3H4Q92791 437 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 CCDC97Q96F63 343 aaPredicted RBP16.09■□□□□ 0.17
PTPRU-205ENST00000460170 PSMD1Q99460 953 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 BHMT2Q9H2M3 363 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 ST7Q9NRC1 585 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 BARHL2Q9NY43 387 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 TRPC6Q9Y210 931 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 LRRIQ4A6NIV6 560 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 LRRN2O75325 713 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
PTPRU-205ENST00000460170 ANKRD35Q8N283 1001 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 PPFIBP2Q8ND30 876 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 TMEM206Q9H813 350 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 ADGRG1Q9Y653 693 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 MYO1FO00160 1098 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 ZBTB5O15062 677 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 TXNRD1Q16881 649 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 BRDTQ58F21 947 aaPredicted RBP16.09■□□□□ 0.17
PTPRU-205ENST00000460170 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.09■□□□□ 0.17
PTPRU-205ENST00000460170 UHMK1Q8TAS1 419 aaKnown RBP16.09■□□□□ 0.17
PTPRU-205ENST00000460170 STMN2Q93045 179 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 EXOC4Q96A65 974 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 CEP95Q96GE4 821 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 PBKQ96KB5 322 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
PTPRU-205ENST00000460170 NPR1P16066 1061 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 ANTXR2P58335 489 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 ITIH3Q06033 890 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 AP3B2Q13367 1082 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 GKAP1Q5VSY0 366 aaPredicted RBP16.09■□□□□ 0.17
PTPRU-205ENST00000460170 DAAM1Q9Y4D1 1078 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 DAPK3O43293 454 aa16.09■□□□□ 0.17
PTPRU-205ENST00000460170 MROH7-TTC4A0A0A0MT08 1334 aa16.08■□□□□ 0.17
PTPRU-205ENST00000460170 SORBS3O60504 671 aa16.08■□□□□ 0.17
PTPRU-205ENST00000460170 ORC2Q13416 577 aaPredicted RBP16.08■□□□□ 0.17
PTPRU-205ENST00000460170 NAA30Q147X3 362 aaPredicted RBP16.08■□□□□ 0.17
PTPRU-205ENST00000460170 TMEM179Q6ZVK1 233 aa16.08■□□□□ 0.17
PTPRU-205ENST00000460170 FDPSP14324 419 aaKnown RBP16.08■□□□□ 0.16
PTPRU-205ENST00000460170 SSX2IPQ9Y2D8 614 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms