RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 GLI4P10075 376 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 GRK2P25098 689 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 GRK3P35626 688 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 LINC00310P59036 64 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 ERVFRD-1P60508 538 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 ZNF460Q14592 562 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 ADGRF1Q5T601 910 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 ABHD17CQ6PCB6 329 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 PCDH19Q8TAB3 1148 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 KCNJ15Q99712 375 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 SLKQ9H2G2 1235 aaPredicted RBP4.81□□□□□ -1.64
VPS8-215ENST00000460158 KCNK12Q9HB15 430 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 RXFP1Q9HBX9 757 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS8-215ENST00000460158 PLAAQ9Y263 795 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 TNPO3Q9Y5L0 923 aaKnown RBP4.81□□□□□ -1.64
VPS8-215ENST00000460158 NUDT19A8MXV4 375 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 FAM47E-STBD1D6RA91 191 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 NUAK1O60285 661 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 OPA1O60313 960 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 DBHP09172 617 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 KCNA6P17658 529 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 NAT1P18440 290 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 PDE6BP35913 854 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 CTSWP56202 376 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 TM4SF20Q53R12 229 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 MROH9Q5TGP6 573 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 WWC2Q6AWC2 1192 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 IRF2BP1Q8IU81 584 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 RIOX2Q8IUF8 465 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 ZC3H7AQ8IWR0 971 aaKnown RBP4.8□□□□□ -1.64
VPS8-215ENST00000460158 MFSD3Q96ES6 412 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 PUS7Q96PZ0 661 aaKnown RBP4.8□□□□□ -1.64
VPS8-215ENST00000460158 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 SLC6A17Q9H1V8 727 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 MAGEC2Q9UBF1 373 aaPredicted RBP4.8□□□□□ -1.64
VPS8-215ENST00000460158 COA3Q9Y2R0 106 aaPredicted RBP4.8□□□□□ -1.64
VPS8-215ENST00000460158 SIT1Q9Y3P8 196 aa4.8□□□□□ -1.64
VPS8-215ENST00000460158 ZC3H12DA2A288 527 aaKnown RBP4.79□□□□□ -1.64
VPS8-215ENST00000460158 FAM83GA6ND36 823 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 F8W031 263 aaPredicted RBP4.79□□□□□ -1.64
VPS8-215ENST00000460158 WNT9AO14904 365 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 SRGAP3O43295 1099 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 ASLP04424 464 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 CYBBP04839 570 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 MPOP05164 745 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 CKMP06732 381 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 PYGMP11217 842 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 COL6A2P12110 1019 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 BUD31P41223 144 aaPredicted RBP4.79□□□□□ -1.64
VPS8-215ENST00000460158 RAB3GAP1Q15042 981 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 CNNM4Q6P4Q7 775 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 PAQR3Q6TCH7 311 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 CABP7Q86V35 215 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 LRRTM3Q86VH5 581 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 NETO2Q8NC67 525 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 EPB41L1Q9H4G0 881 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 INTS7Q9NVH2 962 aaKnown RBP4.79□□□□□ -1.64
VPS8-215ENST00000460158 COQ6Q9Y2Z9 468 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 HCFC2Q9Y5Z7 792 aa4.79□□□□□ -1.64
VPS8-215ENST00000460158 A0A087X0B3 334 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 CCDC66A2RUB6 948 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 OR14I1A6ND48 311 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 NKRFO15226 690 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS8-215ENST00000460158 PEX10O60683 326 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 SEMA7AO75326 666 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 DGKIO75912 1065 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 APPP05067 770 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 JMJD7P0C870 316 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 GNAT1P11488 350 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 MYCLP1P12525 358 aaPredicted RBP4.78□□□□□ -1.64
VPS8-215ENST00000460158 IGFALSP35858 605 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 MASP1P48740 699 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 DNM2P50570 870 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 RBM10P98175 930 aaKnown RBP4.78□□□□□ -1.64
VPS8-215ENST00000460158 TAF7LQ5H9L4 462 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 ZCCHC8Q6NZY4 707 aaKnown RBP4.78□□□□□ -1.64
VPS8-215ENST00000460158 RPTNQ6XPR3 784 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 OTOP3Q7RTS5 596 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 IGSF22Q8N9C0 903 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 PIP4K2CQ8TBX8 421 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS8-215ENST00000460158 DDX1Q92499 740 aaKnown RBP4.78□□□□□ -1.64
VPS8-215ENST00000460158 FBXW5Q969U6 566 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 TARS2Q9BW92 718 aaKnown RBP4.78□□□□□ -1.64
VPS8-215ENST00000460158 CATSPERZQ9NTU4 200 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 KLHL14Q9P2G3 628 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 CBLCQ9ULV8 474 aa4.78□□□□□ -1.64
VPS8-215ENST00000460158 TCRBV5S4A2TA0A5A2 114 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 GSG1L2A8MUP6 293 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 SGSM2O43147 1006 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 GLRX3O76003 335 aaKnown RBP4.77□□□□□ -1.65
VPS8-215ENST00000460158 PDE6AP16499 860 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 HOXA5P20719 270 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 SLC6A11P48066 632 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 ST5P78524 1137 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 SPIRE1Q08AE8 756 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 NR1I3Q14994 352 aa4.77□□□□□ -1.65
VPS8-215ENST00000460158 HABP4Q5JVS0 413 aaKnown RBP4.77□□□□□ -1.65
VPS8-215ENST00000460158 STEAP3Q658P3 488 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms