RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 GRID2IPA4D2P6 1211 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 SMCO2A6NFE2 343 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 PPEF1O14829 653 aaPredicted RBP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 ADAMTS3O15072 1205 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 RNF40O75150 1001 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 USP17L8P0C7I0 530 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 CYP2D6P10635 497 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 IDEP14735 1019 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 CHRNA5P30532 468 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 PAFAH1B1P43034 410 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 EPHB4P54760 987 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 NAPAP54920 295 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 STK4Q13043 487 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 PPFIA1Q13136 1202 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 SLC35G1Q2M3R5 365 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 ASTE1Q2TB18 679 aaPredicted RBP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 TMEM119Q4V9L6 283 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 ASPRV1Q53RT3 343 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 PPP4R3AQ6IN85 833 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 SAMD1Q6SPF0 538 aaPredicted RBP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 C3orf67Q6ZVT6 689 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 ZNF804AQ7Z570 1209 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 TEX2Q8IWB9 1127 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 ZC3H3Q8IXZ2 948 aaKnown RBP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 REXO1Q8N1G1 1221 aaKnown RBP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 JDP2Q8WYK2 163 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 LARP4BQ92615 738 aaKnown RBP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 GPKOWQ92917 476 aaPredicted RBP eCLIP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 CCDC102AQ96A19 550 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 TSG101Q99816 390 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 SH3GL2Q99962 352 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 MMTAG2Q9BU76 263 aaKnown RBP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 LACRTQ9GZZ8 138 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 EFCC1Q9HA90 598 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 BLOC1S4Q9NUP1 217 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 AGPAT5Q9NUQ2 364 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 TMEM51Q9NW97 253 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 BCCIPQ9P287 314 aaKnown RBP eCLIP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 SEC63Q9UGP8 760 aaKnown RBP6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 PCDHA13Q9Y5I0 950 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 STK24Q9Y6E0 443 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 ATXN2Q99700 1313 aaKnown RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 KDM3AQ9Y4C1 1321 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 RCCD1A6NED2 376 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 MYO1CO00159 1063 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 PES1O00541 588 aaKnown RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 CCNT1O60563 726 aaKnown RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 SNHG28P0DPA3 235 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 IL1R1P14778 569 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 ATP2B4P23634 1241 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 MAGEA9P43362 315 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 CDK8P49336 464 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 KIF11P52732 1056 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 SKOR1P84550 965 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 FKBP3Q00688 224 aaKnown RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 GRB10Q13322 594 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 CALCRLQ16602 461 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 PDXDC1Q6P996 788 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 LRRC31Q6UY01 552 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 DPP8Q6V1X1 898 aaPredicted RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 HEATR3Q7Z4Q2 680 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 SPATS2Q86XZ4 545 aaKnown RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 CD302Q8IX05 232 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 MREGQ8N565 214 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 KIAA0895Q8NCT3 520 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 FAM76AQ8TAV0 307 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 CAGE1Q8TC20 777 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 SH3RF3Q8TEJ3 882 aaPredicted RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 LRRC15Q8TF66 581 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 TBC1D22AQ8WUA7 517 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 BAP1Q92560 729 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 RAD54LQ92698 747 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 OSBPL9Q96SU4 736 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 SELENOOQ9BVL4 669 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 IFIH1Q9BYX4 1025 aaKnown RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 NT5C3AQ9H0P0 336 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 SEMA6BQ9H3T3 888 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 FAM204AQ9H8W3 233 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 CEP72Q9P209 647 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 ARHGAP20Q9P2F6 1191 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 TRIM10Q9UDY6 481 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 LRWD1Q9UFC0 647 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 SWAP70Q9UH65 585 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 MAPK8IP1Q9UQF2 711 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 SUGT1Q9Y2Z0 365 aa6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 RRP15Q9Y3B9 282 aaKnown RBP6.78□□□□□ -1.32
UBQLN4-202ENST00000459954 GAKO14976 1311 aa6.77□□□□□ -1.32
UBQLN4-202ENST00000459954 PITPNM2Q9BZ72 1349 aa6.77□□□□□ -1.32
UBQLN4-202ENST00000459954 A0A0U1RQG5 324 aaPredicted RBP6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 USP17L3A6NCW0 530 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 USP17L4A6NCW7 530 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 GOLGA6BA6NDN3 693 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 PP2D1A8MPX8 630 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 AGPSO00116 658 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 PDE2AO00408 941 aaPredicted RBP6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 ENC1O14682 589 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 ZNF263O14978 683 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 C21orf2O43822 256 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 AKR1B10O60218 316 aa6.77□□□□□ -1.33
UBQLN4-202ENST00000459954 ZEB2O60315 1214 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms