RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 HAUS3Q68CZ6 603 aa15.66■□□□□ 0.1
SCFD1-203ENST00000458591 GUF1Q8N442 669 aaKnown RBP15.66■□□□□ 0.1
SCFD1-203ENST00000458591 PROCA1Q8NCQ7 364 aaPredicted RBP15.66■□□□□ 0.1
SCFD1-203ENST00000458591 DNAJC19Q96DA6 116 aa15.66■□□□□ 0.1
SCFD1-203ENST00000458591 PACSIN1Q9BY11 444 aa15.66■□□□□ 0.1
SCFD1-203ENST00000458591 GOLGA6BA6NDN3 693 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 FTCDO95954 541 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 RFC4P35249 363 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 FXR2P51116 673 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCFD1-203ENST00000458591 COASYQ13057 564 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 KCTD1Q719H9 257 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 MMGT1Q8N4V1 131 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 RPGRIP1Q96KN7 1286 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 JMJD4Q9H9V9 463 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 DDX4Q9NQI0 724 aaKnown RBP15.65■□□□□ 0.1
SCFD1-203ENST00000458591 MTMR4Q9NYA4 1195 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 POLLQ9UGP5 575 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 PVALEFA0A1B0GWK0 134 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 RIMBP2O15034 1052 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 RAD21O60216 631 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 KRT79Q5XKE5 535 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 ADGRF4Q8IZF3 695 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 ARL8AQ96BM9 186 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 TSGA10Q9BZW7 698 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 BCAS3Q9H6U6 928 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 NRAPQ86VF7 1730 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 MYH1P12882 1939 aa15.65■□□□□ 0.1
SCFD1-203ENST00000458591 MAST2Q6P0Q8 1798 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 LCA5LO95447 670 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 STAT3P40763 770 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 POLR2FP61218 127 aaKnown RBP15.64■□□□□ 0.09
SCFD1-203ENST00000458591 EHHADHQ08426 723 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 TMEM266Q2M3C6 531 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 CCDC40Q4G0X9 1142 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 CNBD1Q8NA66 436 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 LSM14BQ9BX40 385 aaKnown RBP15.64■□□□□ 0.09
SCFD1-203ENST00000458591 FAM184BQ9ULE4 1060 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L15C9J2P7 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L10C9JJH3 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L13C9JLJ4 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L11C9JVI0 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L18D6R9N7 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L22D6RA61 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L17D6RBQ6 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L19D6RCP7 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L20D6RJB6 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 FAM153BP0C7A2 387 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 TAL1P17542 331 aaPredicted RBP15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L24Q0WX57 530 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 FAM153CQ494X1 144 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 TMEM119Q4V9L6 283 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 COBLL1Q53SF7 1204 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 CCDC181Q5TID7 509 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 PRR5LQ6MZQ0 368 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 USP17L6PQ6QN14 398 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 FAM196AQ6ZSG2 479 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 FNBP4Q8N3X1 1017 aaPredicted RBP15.64■□□□□ 0.09
SCFD1-203ENST00000458591 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 GOLPH3Q9H4A6 298 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 PANK4Q9NVE7 773 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 STK17AQ9UEE5 414 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 DDX25Q9UHL0 483 aaKnown RBP15.64■□□□□ 0.09
SCFD1-203ENST00000458591 FAM153AQ9UHL3 310 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 HYOU1Q9Y4L1 999 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
SCFD1-203ENST00000458591 MARCH6O60337 910 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 GLI1P08151 1106 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 GTF2IP78347 998 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 FAM83BQ5T0W9 1011 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
SCFD1-203ENST00000458591 MYOCDQ8IZQ8 938 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 TBC1D5Q92609 795 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 ZHX3Q9H4I2 956 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 ZNF287Q9HBT7 754 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 KIAA1024Q9UPX6 916 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 NAV1Q8NEY1 1877 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 MYH10P35580 1976 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 POTEB3A0JP26 581 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 GOLGA6CA6NDK9 693 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 POTECB2RU33 542 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 PALMO75781 387 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 GOLGA6DP0CG33 693 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 ACTN1P12814 892 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 KLRC1P26715 233 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 SNAP25P60880 206 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 POTEBQ6S5H4 581 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCFD1-203ENST00000458591 GOLGA6AQ9NYA3 693 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 DAGLAQ9Y4D2 1042 aa15.63■□□□□ 0.09
SCFD1-203ENST00000458591 FAM196BA6NMK8 535 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 CARSP49589 748 aaKnown RBP15.62■□□□□ 0.09
SCFD1-203ENST00000458591 LRRC63Q05C16 580 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 SEMA3FQ13275 785 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 ZCWPW2Q504Y3 356 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 KCTD16Q68DU8 428 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 SH2D3CQ8N5H7 860 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
SCFD1-203ENST00000458591 COL4A3BPQ9Y5P4 624 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 ESYT2A0FGR8 921 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 C6orf229H3BNL8 230 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms