RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 AFG1LQ8WV93 481 aa11.84□□□□□ -0.51
TOP3B-212ENST00000456075 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
TOP3B-212ENST00000456075 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
TOP3B-212ENST00000456075 SEZ6LQ9BYH1 1024 aa11.84□□□□□ -0.51
TOP3B-212ENST00000456075 ANO3Q9BYT9 981 aa11.84□□□□□ -0.51
TOP3B-212ENST00000456075 RGS20O76081 388 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 CLTBP09497 229 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 UBA1P22314 1058 aaKnown RBP11.83□□□□□ -0.52
TOP3B-212ENST00000456075 MRPS9P82933 396 aaKnown RBP11.83□□□□□ -0.52
TOP3B-212ENST00000456075 ARHGAP1Q07960 439 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 SCRN1Q12765 414 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 MTMR1Q13613 665 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 ITGA7Q13683 1181 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 PKN1Q16512 942 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 FAM47CQ5HY64 1035 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 JAKMIP3Q5VZ66 844 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 GIMAP8Q8ND71 665 aaPredicted RBP11.83□□□□□ -0.52
TOP3B-212ENST00000456075 WASF1Q92558 559 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 PGBD1Q96JS3 809 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 INPP4AQ96PE3 977 aaPredicted RBP11.83□□□□□ -0.52
TOP3B-212ENST00000456075 ZMYND12Q9H0C1 365 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 SH3GLB2Q9NR46 395 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 TMEM39AQ9NV64 488 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 VPS54Q9P1Q0 977 aa11.83□□□□□ -0.52
TOP3B-212ENST00000456075 MMP3P08254 477 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 ICAM3P32942 547 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 PSMC6P62333 389 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 PURAQ00577 322 aaKnown RBP11.82□□□□□ -0.52
TOP3B-212ENST00000456075 CELF3Q5SZQ8 465 aaKnown RBP11.82□□□□□ -0.52
TOP3B-212ENST00000456075 ANKRD33Q7Z3H0 272 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 NECAB1Q8N987 351 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 PPTC7Q8NI37 304 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 EMID1Q96A84 441 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-212ENST00000456075 GPRASP2Q96D09 838 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 TOX2Q96NM4 488 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 TMEM260Q9NX78 707 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
TOP3B-212ENST00000456075 SPATA31C2B4DYI2 1134 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 ST18O60284 1047 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 RAG1P15918 1043 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 SREBF1P36956 1147 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 MAGEA10P43363 369 aaPredicted RBP11.81□□□□□ -0.52
TOP3B-212ENST00000456075 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
TOP3B-212ENST00000456075 MDM2Q00987 491 aaPredicted RBP11.81□□□□□ -0.52
TOP3B-212ENST00000456075 SP4Q02446 784 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 RABEP1Q15276 862 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 MYSM1Q5VVJ2 828 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 METTL7BQ6UX53 244 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 CYFIP1Q7L576 1253 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 FAM177A1Q8N128 213 aaPredicted RBP11.81□□□□□ -0.52
TOP3B-212ENST00000456075 GTF3C6Q969F1 213 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 PDLIM7Q9NR12 457 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
TOP3B-212ENST00000456075 LIMCH1Q9UPQ0 1083 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 STK36Q9NRP7 1315 aa11.81□□□□□ -0.52
TOP3B-212ENST00000456075 KIAA1217Q5T5P2 1943 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 MAFGO15525 162 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 PPFIA4O75335 1185 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 SUPT20HL2P0C7V6 817 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 ITGB5P18084 799 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 CDK7P50613 346 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 ARHGAP4P98171 946 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 SP2Q02086 613 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 TRIM29Q14134 588 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 ME3Q16798 604 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 CEP55Q53EZ4 464 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 C7orf31Q8N865 590 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 ZSCAN31Q96LW9 406 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-212ENST00000456075 SENP7Q9BQF6 1050 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 SDF4Q9BRK5 362 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 UBE2OQ9C0C9 1292 aaKnown RBP11.8□□□□□ -0.52
TOP3B-212ENST00000456075 BRMS1Q9HCU9 246 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 JADE2Q9NQC1 790 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 TCEAL9Q9UHQ7 104 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 PCDHA4Q9UN74 947 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 COLQQ9Y215 455 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-212ENST00000456075 UBIAD1Q9Y5Z9 338 aa11.8□□□□□ -0.52
TOP3B-212ENST00000456075 ZNF286BP0CG31 522 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
TOP3B-212ENST00000456075 FAAP100Q0VG06 881 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 HSDL1Q3SXM5 330 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 NFRKBQ6P4R8 1299 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 SH3RF1Q7Z6J0 888 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 FAM126BQ8IXS8 530 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 BLIDQ8IZY5 108 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 ALG1Q9BT22 464 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 KCNH7Q9NS40 1196 aa11.79□□□□□ -0.52
TOP3B-212ENST00000456075 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
TOP3B-212ENST00000456075 RANBP2P49792 3224 aaKnown RBP11.79□□□□□ -0.52
TOP3B-212ENST00000456075 TRIM43BA6NCK2 446 aa11.78□□□□□ -0.52
TOP3B-212ENST00000456075 KIAA0355O15063 1070 aa11.78□□□□□ -0.52
TOP3B-212ENST00000456075 LARGE1O95461 756 aa11.78□□□□□ -0.52
TOP3B-212ENST00000456075 PSEN2P49810 448 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms