RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 DGKDQ16760 1214 aa18.63■□□□□ 0.57
SMPD4-214ENST00000455548 CELF3Q5SZQ8 465 aaKnown RBP18.63■□□□□ 0.57
SMPD4-214ENST00000455548 SH3RF1Q7Z6J0 888 aa18.63■□□□□ 0.57
SMPD4-214ENST00000455548 NLRX1Q86UT6 975 aa18.63■□□□□ 0.57
SMPD4-214ENST00000455548 PPTC7Q8NI37 304 aa18.63■□□□□ 0.57
SMPD4-214ENST00000455548 TRIM43Q96BQ3 446 aaPredicted RBP18.63■□□□□ 0.57
SMPD4-214ENST00000455548 ZFP91Q96JP5 570 aaPredicted RBP18.63■□□□□ 0.57
SMPD4-214ENST00000455548 SPATA31C2B4DYI2 1134 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 UBA1P22314 1058 aaKnown RBP18.62■□□□□ 0.57
SMPD4-214ENST00000455548 PSMC6P62333 389 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 MDM2Q00987 491 aaPredicted RBP18.62■□□□□ 0.57
SMPD4-214ENST00000455548 SSRP1Q08945 709 aaKnown RBP18.62■□□□□ 0.57
SMPD4-214ENST00000455548 STK3Q13188 491 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 AP3B2Q13367 1082 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 C8orf34Q49A92 452 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 MYSM1Q5VVJ2 828 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 MCTP2Q6DN12 878 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 FAM126BQ8IXS8 530 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 CDHR1Q96JP9 859 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 LARP6Q9BRS8 491 aaKnown RBP18.62■□□□□ 0.57
SMPD4-214ENST00000455548 UBE2OQ9C0C9 1292 aaKnown RBP18.62■□□□□ 0.57
SMPD4-214ENST00000455548 C6orf50Q9HD87 102 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 RTEL1Q9NZ71 1219 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 GRIN2DO15399 1336 aa18.62■□□□□ 0.57
SMPD4-214ENST00000455548 RAG1P15918 1043 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 SP2Q02086 613 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 NEDD9Q14511 834 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 CCDC148Q8NFR7 591 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 GPRASP2Q96D09 838 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 SPATA33Q96N06 139 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 SENP7Q9BQF6 1050 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 ZMYND12Q9H0C1 365 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 SLKQ9H2G2 1235 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-214ENST00000455548 MLXIPQ9HAP2 919 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 TBX21Q9UL17 535 aa18.61■□□□□ 0.57
SMPD4-214ENST00000455548 CDKL5O76039 1030 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 CD4P01730 458 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 HOXD8P13378 290 aaPredicted RBP18.6■□□□□ 0.57
SMPD4-214ENST00000455548 GNA11P29992 359 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 CLK2P49760 499 aaKnown RBP18.6■□□□□ 0.57
SMPD4-214ENST00000455548 AK2P54819 239 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 SEMA3FQ13275 785 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 NBPF20Q3BBV1 942 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 NFRKBQ6P4R8 1299 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 GIMAP8Q8ND71 665 aaPredicted RBP18.6■□□□□ 0.57
SMPD4-214ENST00000455548 BICD2Q8TD16 824 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 ANO3Q9BYT9 981 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 SH3GLB2Q9NR46 395 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 UBIAD1Q9Y5Z9 338 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 DOCK5Q9H7D0 1870 aa18.6■□□□□ 0.57
SMPD4-214ENST00000455548 PFKFB2O60825 505 aa18.59■□□□□ 0.57
SMPD4-214ENST00000455548 PPFIA4O75335 1185 aa18.59■□□□□ 0.57
SMPD4-214ENST00000455548 DEXIO95424 95 aa18.59■□□□□ 0.57
SMPD4-214ENST00000455548 SUPT20HL2P0C7V6 817 aa18.59■□□□□ 0.57
SMPD4-214ENST00000455548 NEK4P51957 841 aa18.59■□□□□ 0.57
SMPD4-214ENST00000455548 PTPN11Q06124 597 aaPredicted RBP18.59■□□□□ 0.57
SMPD4-214ENST00000455548 FAM177A1Q8N128 213 aaPredicted RBP18.59■□□□□ 0.57
SMPD4-214ENST00000455548 REXO1Q8N1G1 1221 aaKnown RBP18.59■□□□□ 0.57
SMPD4-214ENST00000455548 BADQ92934 168 aa18.59■□□□□ 0.57
SMPD4-214ENST00000455548 KATNAL1Q9BW62 490 aa18.59■□□□□ 0.57
SMPD4-214ENST00000455548 TPCN1Q9ULQ1 816 aa18.59■□□□□ 0.57
SMPD4-214ENST00000455548 MAFGO15525 162 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 PPFIA3O75145 1194 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 TIMP1P01033 207 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 ITGB5P18084 799 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 SREBF1P36956 1147 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 HSDL1Q3SXM5 330 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 FAM47CQ5HY64 1035 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 METTL7BQ6UX53 244 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 CYFIP1Q7L576 1253 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 TDHQ8IZJ6 230 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 TRPV6Q9H1D0 765 aa18.58■□□□□ 0.56
SMPD4-214ENST00000455548 NOP56O00567 594 aaKnown RBP18.57■□□□□ 0.56
SMPD4-214ENST00000455548 SORBS3O60504 671 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 SCRN1Q12765 414 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 MTMR1Q13613 665 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 JAKMIP3Q5VZ66 844 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 PGBD1Q96JS3 809 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 MXRA8Q9BRK3 442 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 JADE2Q9NQC1 790 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 TMEM260Q9NX78 707 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 VPS54Q9P1Q0 977 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 PCDH10Q9P2E7 1040 aa18.57■□□□□ 0.56
SMPD4-214ENST00000455548 B4GALT4O60513 344 aa18.56■□□□□ 0.56
SMPD4-214ENST00000455548 F2P00734 622 aa18.56■□□□□ 0.56
SMPD4-214ENST00000455548 ITGB8P26012 769 aa18.56■□□□□ 0.56
SMPD4-214ENST00000455548 PSEN2P49810 448 aa18.56■□□□□ 0.56
SMPD4-214ENST00000455548 CHMP4BP1P59074 171 aa18.56■□□□□ 0.56
SMPD4-214ENST00000455548 ARHGAP4P98171 946 aa18.56■□□□□ 0.56
SMPD4-214ENST00000455548 FPGSQ05932 587 aa18.56■□□□□ 0.56
SMPD4-214ENST00000455548 KAT2BQ92831 832 aa18.56■□□□□ 0.56
SMPD4-214ENST00000455548 STK36Q9NRP7 1315 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 ZNF286BP0CG31 522 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 NLRP5P59047 1200 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 MFSD10Q14728 455 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 CEP55Q53EZ4 464 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 MFSD5Q6N075 450 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 NIPA1Q7RTP0 329 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 SESTD1Q86VW0 696 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 HIPK3Q9H422 1215 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms