RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TSPY3P0CV98 308 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 TSPY8P0CW00 308 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 RARBP10826 455 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 BMP2P12643 396 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 GNAT2P19087 354 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 PTGS1P23219 599 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 MCCP23508 829 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 TLE2Q04725 743 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 PPARAQ07869 468 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 LRIT3Q3SXY7 679 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 ZMYM1Q5SVZ6 1142 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 C9orf50Q5SZB4 431 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 VPS53Q5VIR6 699 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 SLFN13Q68D06 897 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 GIMAP6Q6P9H5 292 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 RASGRP2Q7LDG7 609 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 PRPF38AQ8NAV1 312 aaKnown RBP5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 C1orf216Q8TAB5 229 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 MKL1Q969V6 931 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 TRIM43Q96BQ3 446 aaPredicted RBP5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 XPNPEP3Q9NQH7 507 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 IL17RBQ9NRM6 502 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 HOMER2Q9NSB8 354 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 MTMR10Q9NXD2 777 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 PRKAG2Q9UGJ0 569 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 ZNF232Q9UNY5 417 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 CTDP1Q9Y5B0 961 aaPredicted RBP5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 ZNF236Q9UL36 1845 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 TRIP12Q14669 1992 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 LTBP2Q14767 1821 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 DNAJC25-GNG10A0A024R161 153 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 FOXP2O15409 715 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 ADCY6O43306 1168 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 RANBP6O60518 1105 aaKnown RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 TTLL1O95922 423 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 BMP3P12645 472 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 MX1P20591 662 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 CTSOP43234 321 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 CNTN2Q02246 1040 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 PDE4BQ07343 736 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 KCNA10Q16322 511 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 FOXD4L5Q5VV16 416 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 TTBK2Q6IQ55 1244 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 TMEM214Q6NUQ4 689 aaKnown RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 CCDC174Q6PII3 467 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 KCTD1Q719H9 257 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 RNF180Q86T96 592 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 ANKRD35Q8N283 1001 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 NEDD1Q8NHV4 660 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 ZDHHC1Q8WTX9 485 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 FAM227BQ96M60 508 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 FGD4Q96M96 766 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 YTHDC1Q96MU7 727 aaKnown RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 ZSCAN10Q96SZ4 725 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 TEX13BQ9BXU2 312 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 NACAP1Q9BZK3 213 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 SAP130Q9H0E3 1048 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 NAPBQ9H115 298 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 SLC38A10Q9HBR0 1119 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 PDLIM7Q9NR12 457 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 FEM1BQ9UK73 627 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 ZHX1Q9UKY1 873 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 PHF24Q9UPV7 400 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 CNPY2Q9Y2B0 182 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 DIS3Q9Y2L1 958 aaKnown RBP5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 HCN4Q9Y3Q4 1203 aa5.56□□□□□ -1.52
GTF3C3-208ENST00000455546 ROBO3Q96MS0 1386 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 ZNF536O15090 1300 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 BAZ2BQ9UIF8 2168 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 MYH7BA7E2Y1 1941 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 MYH6P13533 1939 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 A0A1W2PQ45 241 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 A0A1W2PQY0 241 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 TSPY2A6NKD2 308 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 ATP2A1O14983 1001 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 PQBP1O60828 265 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 ADAMTS4O75173 837 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 FGAP02671 866 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 SLC3A2P08195 630 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 ALAS1P13196 640 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 AKR1A1P14550 325 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 SLC16A2P36021 539 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 SLC1A4P43007 532 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 PHKA2P46019 1235 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 PLA2G4AP47712 749 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 PDE1AP54750 535 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 EPHB4P54760 987 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 RRP1P56182 461 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 PSMA6P60900 246 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 FAAP100Q0VG06 881 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 IKQ13123 557 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 ACVR2BQ13705 512 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 SNX17Q15036 470 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 LRRFIP1Q32MZ4 808 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 CCDC144BQ3MJ40 725 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 MUM1L1Q5H9M0 696 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 RRP12Q5JTH9 1297 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 TMEM63BQ5T3F8 832 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms