RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 NUDCQ9Y266 331 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 PTPN22Q9Y2R2 807 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 TRIM17Q9Y577 477 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 EOMESO95936 686 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 USP17L7P0C7H9 530 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 RPS8P62241 208 aaKnown RBP4.83□□□□□ -1.64
RBM39-220ENST00000455343 CAP1Q01518 475 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 KCNA1Q09470 495 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 MAP3K11Q16584 847 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 NKPD1Q17RQ9 610 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 NBPF9Q3BBW0 867 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 PRAMEF18Q5VWM3 479 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 SLC23A3Q6PIS1 610 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 ARMCX6Q7L4S7 300 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 COPS6Q7L5N1 327 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 KCT2Q8NC54 265 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 ASB11Q8WXH4 323 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 ELMO3Q96BJ8 720 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 CFAP53Q96M91 514 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 PLEKHF1Q96S99 279 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 ISCA1Q9BUE6 129 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 PRO3102Q9H379 93 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 MYOZ2Q9NPC6 264 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 FAM8A1Q9UBU6 413 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 CYP8B1Q9UNU6 501 aa4.83□□□□□ -1.64
RBM39-220ENST00000455343 SCAF8Q9UPN6 1271 aaKnown RBP4.83□□□□□ -1.64
RBM39-220ENST00000455343 MANSC4A6NHS7 340 aaPredicted RBP4.82□□□□□ -1.64
RBM39-220ENST00000455343 UNCXA6NJT0 531 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 WNT10BO00744 389 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 LRIG2O94898 1065 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 ANXA1P04083 346 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 P4HBP07237 508 aaKnown RBP4.82□□□□□ -1.64
RBM39-220ENST00000455343 MMP14P50281 582 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 CLCN7P51798 805 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 INPP5AQ14642 412 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 ZNF648Q5T619 568 aaPredicted RBP4.82□□□□□ -1.64
RBM39-220ENST00000455343 LRFN4Q6PJG9 635 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 ZNF507Q8TCN5 953 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 XAGE3Q8WTP9 111 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 GAL3ST3Q96A11 431 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 ZBED3Q96IU2 234 aaPredicted RBP4.82□□□□□ -1.64
RBM39-220ENST00000455343 ZNF333Q96JL9 665 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 PRDM7Q9NQW5 492 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 PRDM5Q9NQX1 630 aaPredicted RBP4.82□□□□□ -1.64
RBM39-220ENST00000455343 BABAM1Q9NWV8 329 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 MAPK8IP1Q9UQF2 711 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 PAPPA2Q9BXP8 1791 aa4.82□□□□□ -1.64
RBM39-220ENST00000455343 ARID1BQ8NFD5 2236 aaPredicted RBP4.82□□□□□ -1.64
RBM39-220ENST00000455343 PRAMEF27A3QJZ7 478 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 H0YGN5 161 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 UFL1O94874 794 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 SLITRK5O94991 958 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 ZBTB48P10074 688 aaPredicted RBP4.81□□□□□ -1.64
RBM39-220ENST00000455343 EIF2S2P20042 333 aaKnown RBP4.81□□□□□ -1.64
RBM39-220ENST00000455343 PPP2R1AP30153 589 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 PTPN11Q06124 597 aaPredicted RBP4.81□□□□□ -1.64
RBM39-220ENST00000455343 IKZF1Q13422 519 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 NFE2L2Q16236 605 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 DACT2Q5SW24 774 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 SV2BQ7L1I2 683 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 CYFIP1Q7L576 1253 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 ARMC9Q7Z3E5 817 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 SLC17A8Q8NDX2 589 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 TMEM40Q8WWA1 233 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 FAM89AQ96GI7 184 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 PLPPR2Q96GM1 343 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 ERO1AQ96HE7 468 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 PTPN18Q99952 460 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 FOXQ1Q9C009 403 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 FBRSQ9HAH7 460 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 TTF2Q9UNY4 1162 aaKnown RBP4.81□□□□□ -1.64
RBM39-220ENST00000455343 VCANP13611 3396 aa4.81□□□□□ -1.64
RBM39-220ENST00000455343 LRRC37AA6NMS7 1700 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 IRS4O14654 1257 aaPredicted RBP4.8□□□□□ -1.64
RBM39-220ENST00000455343 LDHBP07195 334 aaKnown RBP4.8□□□□□ -1.64
RBM39-220ENST00000455343 NF2P35240 595 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 SP3Q02447 781 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 ZP2Q05996 745 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 AIMP1Q12904 312 aaKnown RBP4.8□□□□□ -1.64
RBM39-220ENST00000455343 CRHR2Q13324 411 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 SLBPQ14493 270 aaKnown RBP eCLIP4.8□□□□□ -1.64
RBM39-220ENST00000455343 WIPI1Q5MNZ9 446 aaPredicted RBP4.8□□□□□ -1.64
RBM39-220ENST00000455343 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.8□□□□□ -1.64
RBM39-220ENST00000455343 C22orf34Q6ZV56 151 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 HDXQ7Z353 690 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 UBE2Q1Q7Z7E8 422 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 PLBD2Q8NHP8 589 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 CD99L2Q8TCZ2 262 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 FRMD6Q96NE9 622 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 TSPYL4Q9UJ04 414 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 UNC80Q8N2C7 3258 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 COL4A1P02462 1669 aa4.8□□□□□ -1.64
RBM39-220ENST00000455343 NUP98P52948 1817 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 MYO3BQ8WXR4 1341 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 CUL9Q8IWT3 2517 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 WTIPA6NIX2 430 aaPredicted RBP4.79□□□□□ -1.64
RBM39-220ENST00000455343 FARP2O94887 1054 aaPredicted RBP4.79□□□□□ -1.64
RBM39-220ENST00000455343 ZNF865P0CJ78 1059 aaPredicted RBP4.79□□□□□ -1.64
RBM39-220ENST00000455343 GNA15P30679 374 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 CAP2P40123 477 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms