RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 FUT2Q10981 343 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 FAM47CQ5HY64 1035 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 PCNX4Q63HM2 1172 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 ZNF365Q70YC5 407 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 SMARCC2Q8TAQ2 1214 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 GPKOWQ92917 476 aaPredicted RBP eCLIP13.87□□□□□ -0.19
USP40-210ENST00000454354 VWCEQ96DN2 955 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 GUCD1Q96NT3 240 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 CTAGE1Q96RT6 745 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 KATNAL1Q9BW62 490 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 STXBP5LQ9Y2K9 1186 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 SNX14Q9Y5W7 946 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 EYSQ5T1H1 3165 aa13.87□□□□□ -0.19
USP40-210ENST00000454354 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 HAS3O00219 553 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 REC8O95072 547 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 PFKMP08237 780 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 SEMA3FQ13275 785 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 RTN1Q16799 776 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 HSDL1Q3SXM5 330 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 PPP1R18Q6NYC8 613 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 TEX2Q8IWB9 1127 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 FBXL16Q8N461 479 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 PPP1R13LQ8WUF5 828 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 SCLYQ96I15 445 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 SPATA33Q96N06 139 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 PSTPIP2Q9H939 334 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 WDR81Q562E7 1941 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 UNC80Q8N2C7 3258 aa13.86□□□□□ -0.19
USP40-210ENST00000454354 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 SPATA31C2B4DYI2 1134 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 hCG_1984214I3L0E3 225 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 FIBPO43427 364 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 ZNF286BP0CG31 522 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 RFC2P35250 354 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 PSEN2P49810 448 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 RBL2Q08999 1139 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 MFSD10Q14728 455 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 WWC2Q6AWC2 1192 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 GDF6Q6KF10 455 aaPredicted RBP13.85□□□□□ -0.19
USP40-210ENST00000454354 RPUSD2Q8IZ73 545 aaKnown RBP13.85□□□□□ -0.19
USP40-210ENST00000454354 CCDC82Q8N4S0 544 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 ZNF713Q8N859 430 aaPredicted RBP13.85□□□□□ -0.19
USP40-210ENST00000454354 ZFP91Q96JP5 570 aaPredicted RBP13.85□□□□□ -0.19
USP40-210ENST00000454354 JAKMIP1Q96N16 626 aaKnown RBP13.85□□□□□ -0.19
USP40-210ENST00000454354 AGXT2Q9BYV1 514 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 TTYH1Q9H313 450 aaPredicted RBP13.85□□□□□ -0.19
USP40-210ENST00000454354 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
USP40-210ENST00000454354 GTF2IRD1Q9UHL9 959 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 MICAL3Q7RTP6 2002 aa13.85□□□□□ -0.19
USP40-210ENST00000454354 FGBP02675 491 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 CPA1P15085 419 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 DNAJB2P25686 324 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 BFSP2Q13515 415 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 NEDD9Q14511 834 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 PTGISQ16647 500 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 KIAA0753Q2KHM9 967 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 ERICH6BQ5W0A0 696 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 BLOC1S2Q6QNY1 142 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 METTL7BQ6UX53 244 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 C16orf70Q9BSU1 422 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
USP40-210ENST00000454354 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
USP40-210ENST00000454354 HDAC6Q9UBN7 1215 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 NOD1Q9Y239 953 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 CUL9Q8IWT3 2517 aa13.84□□□□□ -0.19
USP40-210ENST00000454354 SIP14410 1827 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 A0A0C4DFX4 3053 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 RPS6KB1P23443 525 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 CDC27P30260 824 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 HOXC8P31273 242 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 UBE2SQ16763 222 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 Q6ZUG5 572 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 NLRX1Q86UT6 975 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 C7orf31Q8N865 590 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 AFAP1L1Q8TED9 768 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 DHX38Q92620 1227 aaKnown RBP13.83□□□□□ -0.2
USP40-210ENST00000454354 GPRASP2Q96D09 838 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 FAM161BQ96MY7 647 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 ALG1Q9BT22 464 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 BCAS3Q9H6U6 928 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 RTEL1Q9NZ71 1219 aa13.83□□□□□ -0.2
USP40-210ENST00000454354 SPDYE3A6NKU9 549 aa13.82□□□□□ -0.2
USP40-210ENST00000454354 STXBP3O00186 592 aa13.82□□□□□ -0.2
USP40-210ENST00000454354 SORBS3O60504 671 aa13.82□□□□□ -0.2
USP40-210ENST00000454354 LGALS2P05162 132 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms