RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 LCHNA4D1U4 455 aa27.55■■■□□ 2
LYSMD2-202ENST00000454181 HAS3O00219 553 aa27.55■■■□□ 2
LYSMD2-202ENST00000454181 GGPS1O95749 300 aa27.55■■■□□ 2
LYSMD2-202ENST00000454181 HOXA13P31271 388 aaPredicted RBP27.55■■■□□ 2
LYSMD2-202ENST00000454181 CELF3Q5SZQ8 465 aaKnown RBP27.55■■■□□ 2
LYSMD2-202ENST00000454181 MYSM1Q5VVJ2 828 aa27.55■■■□□ 2
LYSMD2-202ENST00000454181 VSIG10LQ86VR7 867 aa27.55■■■□□ 2
LYSMD2-202ENST00000454181 HOMER1Q86YM7 354 aa27.55■■■□□ 2
LYSMD2-202ENST00000454181 MLXIPQ9HAP2 919 aa27.55■■■□□ 2
LYSMD2-202ENST00000454181 GCOM1H8Y6P7 765 aaPredicted RBP27.54■■■□□ 2
LYSMD2-202ENST00000454181 OPLAHO14841 1288 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 GJB5O95377 273 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 POLR2MP0CAP2 368 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 TGFB3P10600 412 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 CCND2P30279 289 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 GHRHRQ02643 423 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 KIAA1217Q5T5P2 1943 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 ZNF618Q5T7W0 954 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 MTMR8Q96EF0 704 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 LMCD1Q9NZU5 365 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 MAD2L2Q9UI95 211 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 MTUS1Q9ULD2 1270 aa27.54■■■□□ 2
LYSMD2-202ENST00000454181 TCF20Q9UGU0 1960 aaKnown RBP27.53■■■□□ 2
LYSMD2-202ENST00000454181 EMSYQ7Z589 1322 aa27.53■■■□□ 2
LYSMD2-202ENST00000454181 ERICH2A1L162 156 aa27.53■■■□□ 2
LYSMD2-202ENST00000454181 PGM5Q15124 567 aa27.53■■■□□ 2
LYSMD2-202ENST00000454181 SEC23AQ15436 765 aa27.53■■■□□ 2
LYSMD2-202ENST00000454181 FAM117BQ6P1L5 589 aa27.53■■■□□ 2
LYSMD2-202ENST00000454181 TGS1Q96RS0 853 aaKnown RBP27.53■■■□□ 2
LYSMD2-202ENST00000454181 MYH6P13533 1939 aa27.53■■■□□ 2
LYSMD2-202ENST00000454181 TRANK1O15050 2925 aa27.52■■■□□ 2
LYSMD2-202ENST00000454181 PALM3A6NDB9 673 aaPredicted RBP27.52■■■□□ 2
LYSMD2-202ENST00000454181 PPP1R11O60927 126 aaPredicted RBP27.52■■■□□ 2
LYSMD2-202ENST00000454181 LGR5O75473 907 aa27.52■■■□□ 2
LYSMD2-202ENST00000454181 HOXD8P13378 290 aaPredicted RBP27.52■■■□□ 2
LYSMD2-202ENST00000454181 ZNF200P98182 395 aaPredicted RBP27.52■■■□□ 2
LYSMD2-202ENST00000454181 HSDL1Q3SXM5 330 aa27.52■■■□□ 2
LYSMD2-202ENST00000454181 CYB5R4Q7L1T6 521 aa27.52■■■□□ 2
LYSMD2-202ENST00000454181 SPRED2Q7Z698 418 aa27.52■■■□□ 2
LYSMD2-202ENST00000454181 FCHSD1Q86WN1 690 aa27.52■■■□□ 2
LYSMD2-202ENST00000454181 LPXNO60711 386 aa27.51■■□□□ 1.99
LYSMD2-202ENST00000454181 RGS20O76081 388 aa27.51■■□□□ 1.99
LYSMD2-202ENST00000454181 THPOP40225 353 aa27.51■■□□□ 1.99
LYSMD2-202ENST00000454181 TRIM71Q2Q1W2 868 aaKnown RBP27.51■■□□□ 1.99
LYSMD2-202ENST00000454181 GDPD5Q8WTR4 605 aa27.51■■□□□ 1.99
LYSMD2-202ENST00000454181 U3KPZ7 1027 aaPredicted RBP27.51■■□□□ 1.99
LYSMD2-202ENST00000454181 RSPH10B2B2RC85 870 aa27.5■■□□□ 1.99
LYSMD2-202ENST00000454181 IFIT3O14879 490 aaKnown RBP27.5■■□□□ 1.99
LYSMD2-202ENST00000454181 AMHP03971 560 aa27.5■■□□□ 1.99
LYSMD2-202ENST00000454181 RSPH10BP0C881 870 aa27.5■■□□□ 1.99
LYSMD2-202ENST00000454181 ERVK-21P61565 698 aa27.5■■□□□ 1.99
LYSMD2-202ENST00000454181 GNPTABQ3T906 1256 aa27.5■■□□□ 1.99
LYSMD2-202ENST00000454181 PIGSQ96S52 555 aa27.5■■□□□ 1.99
LYSMD2-202ENST00000454181 RAPGEFL1Q9UHV5 662 aa27.5■■□□□ 1.99
LYSMD2-202ENST00000454181 C17orf102A2RUQ5 167 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 NOP56O00567 594 aaKnown RBP27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 UBA1P22314 1058 aaKnown RBP27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 GRM4Q14833 912 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 SART3Q15020 963 aaKnown RBP27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 RALYLQ86SE5 291 aaKnown RBP27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 IL31RAQ8NI17 732 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 EXOC6Q8TAG9 804 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 RUFY2Q8WXA3 655 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 ATP6V0A1Q93050 837 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 WNT8BQ93098 351 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 ZFP91Q96JP5 570 aaPredicted RBP27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 SUGCTQ9HAC7 445 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 INSL6Q9Y581 213 aa27.49■■□□□ 1.99
LYSMD2-202ENST00000454181 LINC01553A4QN01 128 aa27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 H3BRB1 525 aa27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 SP2Q02086 613 aa27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 TCTN1Q2MV58 587 aa27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 TRAF7Q6Q0C0 670 aa27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 SERINC5Q86VE9 423 aa27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 C16orf70Q9BSU1 422 aa27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 TUT1Q9H6E5 874 aaKnown RBP27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 RIOX1Q9H6W3 641 aa27.48■■□□□ 1.99
LYSMD2-202ENST00000454181 PNMA6FA0A0J9YX94 578 aa27.47■■□□□ 1.99
LYSMD2-202ENST00000454181 MBTPS1Q14703 1052 aa27.47■■□□□ 1.99
LYSMD2-202ENST00000454181 MYOCDQ8IZQ8 938 aa27.47■■□□□ 1.99
LYSMD2-202ENST00000454181 DBF4BQ8NFT6 615 aa27.47■■□□□ 1.99
LYSMD2-202ENST00000454181 WTAPQ15007 396 aa27.46■■□□□ 1.99
LYSMD2-202ENST00000454181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.46■■□□□ 1.99
LYSMD2-202ENST00000454181 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
LYSMD2-202ENST00000454181 MYH7BA7E2Y1 1941 aa27.45■■□□□ 1.99
LYSMD2-202ENST00000454181 STAM2O75886 525 aa27.45■■□□□ 1.98
LYSMD2-202ENST00000454181 GNAT1P11488 350 aa27.45■■□□□ 1.98
LYSMD2-202ENST00000454181 NEDD9Q14511 834 aa27.45■■□□□ 1.98
LYSMD2-202ENST00000454181 HIC1Q14526 733 aa27.45■■□□□ 1.98
LYSMD2-202ENST00000454181 CATIPQ7Z7H3 387 aa27.45■■□□□ 1.98
LYSMD2-202ENST00000454181 USP26Q9BXU7 913 aa27.45■■□□□ 1.98
LYSMD2-202ENST00000454181 IL25Q9H293 177 aa27.45■■□□□ 1.98
LYSMD2-202ENST00000454181 LGALS2P05162 132 aa27.44■■□□□ 1.98
LYSMD2-202ENST00000454181 SMIM10L2AP0DMW4 78 aa27.44■■□□□ 1.98
LYSMD2-202ENST00000454181 SMIM10L2BP0DMW5 78 aa27.44■■□□□ 1.98
LYSMD2-202ENST00000454181 FBXO22Q8NEZ5 403 aa27.44■■□□□ 1.98
LYSMD2-202ENST00000454181 NCOA7Q8NI08 942 aa27.44■■□□□ 1.98
LYSMD2-202ENST00000454181 SEPT8Q92599 483 aa27.44■■□□□ 1.98
LYSMD2-202ENST00000454181 GPKOWQ92917 476 aaPredicted RBP eCLIP27.44■■□□□ 1.98
LYSMD2-202ENST00000454181 XIRP2A4UGR9 3374 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms