RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 UVSSAQ2YD98 709 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 ANGEL2Q5VTE6 544 aaKnown RBP5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 IL31Q6EBC2 164 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 B3GNT9Q6UX72 402 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 TSPYL5Q86VY4 417 aaPredicted RBP5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 SVOPQ8N4V2 548 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 C2orf69Q8N8R5 385 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 LMBR1Q8WVP7 490 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 UTP4Q969X6 686 aaKnown RBP5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 KCNJ15Q99712 375 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 SARGQ9BW04 601 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 FOXP3Q9BZS1 431 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 C9orf172C9J069 976 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 FAM47E-STBD1D6RA91 191 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 KCNK3O14649 394 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 CREB3O43889 395 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 ASGR2P07307 311 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 SLC9A1P19634 815 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 CCND1P24385 295 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 TPP2P29144 1249 aaPredicted RBP5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 SCAND1P57086 179 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 PHC1P78364 1004 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 OCRLQ01968 901 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 LSAMPQ13449 338 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 GBX1Q14549 363 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 VPS72Q15906 364 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 ARHGAP44Q17R89 818 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 FAM47CQ5HY64 1035 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 HABP4Q5JVS0 413 aaKnown RBP5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 PAOXQ6QHF9 649 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 BEND4Q6ZU67 534 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 C11orf74Q86VG3 221 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 RASSF3Q86WH2 238 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 KSR1Q8IVT5 923 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 MFSD4AQ8N468 514 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 SH3RF2Q8TEC5 729 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 RUNDC1Q96C34 613 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 ELF4Q99607 663 aaPredicted RBP5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 SSBP4Q9BWG4 385 aaPredicted RBP5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 GIT1Q9Y2X7 761 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 SPO11Q9Y5K1 396 aa5.46□□□□□ -1.54
HMGN3P1-201ENST00000453847 FAM170BA6NMN3 283 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 APAF1O14727 1248 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 SPATA31C1P0DKV0 1188 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 CYP2C19P33261 490 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 OXCT1P55809 520 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 ST5P78524 1137 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 PURAQ00577 322 aaKnown RBP5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 SEC23AQ15436 765 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 MINDY4Q4G0A6 757 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 ZAR1Q86SH2 424 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 PJA1Q8NG27 643 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 FBXO41Q8TF61 875 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 CLIP3Q96DZ5 547 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 FAM83CQ9BQN1 747 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 KCNF1Q9H3M0 494 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 ZMAT4Q9H898 229 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 PRDM16Q9HAZ2 1276 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 CATSPERZQ9NTU4 200 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 GTF2IRD1Q9UHL9 959 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 TCFL5Q9UL49 500 aa5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 TIMM13Q9Y5L4 95 aaPredicted RBP5.45□□□□□ -1.54
HMGN3P1-201ENST00000453847 HMX2A2RU54 273 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 WTIPA6NIX2 430 aaPredicted RBP5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 A6NNZ2 444 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 MAN2B1O00754 1011 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 GSTA4O15217 222 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 NKRFO15226 690 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 FKTNO75072 461 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 KRT37O76014 449 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 COL6A2P12110 1019 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 PTX3P26022 381 aaPredicted RBP5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 NEK3P51956 506 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 NRG1Q02297 640 aaPredicted RBP5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 GTF2H3Q13889 308 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 CRY1Q16526 586 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 C10orf62Q5T681 223 aaPredicted RBP5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 CDKAL1Q5VV42 579 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 HHIPL2Q6UWX4 724 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 ZNF765Q7L2R6 523 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 PNMA8AQ86V59 439 aaPredicted RBP5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 PTRH1Q86Y79 214 aaKnown RBP5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 CLEC10AQ8IUN9 316 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 NOSTRINQ8IVI9 506 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 HSPBAP1Q96EW2 488 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 LRGUKQ96M69 825 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 AIFM3Q96NN9 605 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 ORAI2Q96SN7 254 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 BOCQ9BWV1 1114 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 PCGF6Q9BYE7 350 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 ZDHHC5Q9C0B5 715 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 MKS1Q9NXB0 559 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 PLAGL2Q9UPG8 496 aa5.44□□□□□ -1.54
HMGN3P1-201ENST00000453847 SLC12A8A0AV02 714 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 GOLGA8AA7E2F4 631 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 GOLGA8BA8MQT2 603 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 IFRD1O00458 451 aaPredicted RBP5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 CFBP00751 764 aa5.43□□□□□ -1.54
HMGN3P1-201ENST00000453847 APPP05067 770 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms