RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 XRRA1Q6P2D8 792 aa16.75■□□□□ 0.27
HSPG2-207ENST00000453796 ZNF713Q8N859 430 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-207ENST00000453796 PPP1R12CQ9BZL4 782 aa16.75■□□□□ 0.27
HSPG2-207ENST00000453796 BCAS3Q9H6U6 928 aa16.75■□□□□ 0.27
HSPG2-207ENST00000453796 UMODL1Q5DID0 1318 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 CCDC196A0A1B0GTZ2 297 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 SPATA31C2B4DYI2 1134 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 GGPS1O95749 300 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 PTPN11Q06124 597 aaPredicted RBP16.74■□□□□ 0.27
HSPG2-207ENST00000453796 NTRK3Q16288 839 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 DGKDQ16760 1214 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 HSDL1Q3SXM5 330 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 GNPTABQ3T906 1256 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 TEX2Q8IWB9 1127 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 PPP1R13LQ8WUF5 828 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
HSPG2-207ENST00000453796 HIPK3Q9H422 1215 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 RIC8AQ9NPQ8 531 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 TRMT13Q9NUP7 481 aaKnown RBP16.74■□□□□ 0.27
HSPG2-207ENST00000453796 BARHL2Q9NY43 387 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 RTEL1Q9NZ71 1219 aa16.74■□□□□ 0.27
HSPG2-207ENST00000453796 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
HSPG2-207ENST00000453796 HAS3O00219 553 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 FIBPO43427 364 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 F2P00734 622 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 CSF2RAP15509 400 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 PDIA3P30101 505 aaKnown RBP16.73■□□□□ 0.27
HSPG2-207ENST00000453796 CYP2C18P33260 490 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 NAPAP54920 295 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 PKN1Q16512 942 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 PFKFB3Q16875 520 aaPredicted RBP16.73■□□□□ 0.27
HSPG2-207ENST00000453796 C16orf59Q7L2K0 433 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 SESTD1Q86VW0 696 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 WNT8AQ9H1J5 351 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
HSPG2-207ENST00000453796 SUPT20HL2P0C7V6 817 aa16.72■□□□□ 0.27
HSPG2-207ENST00000453796 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
HSPG2-207ENST00000453796 PPIGQ13427 754 aaKnown RBP eCLIP16.72■□□□□ 0.274e-8■□□□□ 9.1
HSPG2-207ENST00000453796 TMEM199Q8N511 208 aa16.72■□□□□ 0.27
HSPG2-207ENST00000453796 SPATA33Q96N06 139 aa16.72■□□□□ 0.27
HSPG2-207ENST00000453796 CTAGE1Q96RT6 745 aa16.72■□□□□ 0.27
HSPG2-207ENST00000453796 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■□□□ 13.2
HSPG2-207ENST00000453796 UPF3BQ9BZI7 483 aaKnown RBP16.72■□□□□ 0.27
HSPG2-207ENST00000453796 CYP46A1Q9Y6A2 500 aa16.72■□□□□ 0.27
HSPG2-207ENST00000453796 SPDYE3A6NKU9 549 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
HSPG2-207ENST00000453796 SORBS3O60504 671 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 PPFIA4O75335 1185 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 ZNF286BP0CG31 522 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 CYP2C9P11712 490 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 SCG2P13521 617 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 ITGB5P18084 799 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 PSEN2P49810 448 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 FAM47CQ5HY64 1035 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 TMEM240Q5SV17 173 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 GPRASP2Q96D09 838 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 VWCEQ96DN2 955 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 IL17RAQ96F46 866 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 SENP7Q9BQF6 1050 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 C16orf70Q9BSU1 422 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 MLXIPQ9HAP2 919 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 UBIAD1Q9Y5Z9 338 aa16.71■□□□□ 0.27
HSPG2-207ENST00000453796 TET1Q8NFU7 2136 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 GBF1Q92538 1859 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 SMCO2A6NFE2 343 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 IFNAR1P17181 557 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 ADCY7P51828 1080 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 NEDD9Q14511 834 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 MFSD10Q14728 455 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 RASIP1Q5U651 963 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 GDF6Q6KF10 455 aaPredicted RBP16.7■□□□□ 0.26
HSPG2-207ENST00000453796 METTL7BQ6UX53 244 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 PHKBQ93100 1093 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 ZNF274Q96GC6 653 aaPredicted RBP16.7■□□□□ 0.26
HSPG2-207ENST00000453796 KATNAL1Q9BW62 490 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 NCOA5Q9HCD5 579 aaKnown RBP16.7■□□□□ 0.26
HSPG2-207ENST00000453796 IL23AQ9NPF7 189 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 GTF2IRD1Q9UHL9 959 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 TELO2Q9Y4R8 837 aa16.7■□□□□ 0.26
HSPG2-207ENST00000453796 KAT6AQ92794 2004 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 ESYT2A0FGR8 921 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 ADAMTS3O15072 1205 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 ATP9AO75110 1047 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 FOSP01100 380 aaPredicted RBP16.69■□□□□ 0.26
HSPG2-207ENST00000453796 KCNA2P16389 499 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 CCL23P55773 120 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 ANAPC15P60006 121 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
HSPG2-207ENST00000453796 KIAA0753Q2KHM9 967 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 CYFIP1Q7L576 1253 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 NLRX1Q86UT6 975 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 PGBD1Q96JS3 809 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 RNPC3Q96LT9 517 aaKnown RBP16.69■□□□□ 0.26
HSPG2-207ENST00000453796 GPR20Q99678 358 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 RNF26Q9BY78 433 aaPredicted RBP16.69■□□□□ 0.26
HSPG2-207ENST00000453796 ZMYND12Q9H0C1 365 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 HDAC6Q9UBN7 1215 aa16.69■□□□□ 0.26
HSPG2-207ENST00000453796 PITPNM1O00562 1244 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms