RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 MAD2L2Q9UI95 211 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 ZBTB5O15062 677 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 NBNO60934 754 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 COL9A1P20849 921 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 ZNF200P98182 395 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-210ENST00000453030 LAMC2Q13753 1193 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 SEC23AQ15436 765 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 TCTN1Q2MV58 587 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 CNKSR3Q6P9H4 555 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 GDPD5Q8WTR4 605 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 WNT8BQ93098 351 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 ZFP91Q96JP5 570 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-210ENST00000453030 ZBED2Q9BTP6 218 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 RAPGEFL1Q9UHV5 662 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 MTUS1Q9ULD2 1270 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 PCDHA1Q9Y5I3 950 aa13.57□□□□□ -0.24
GARNL3-210ENST00000453030 RGS20O76081 388 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 GGPS1O95749 300 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
GARNL3-210ENST00000453030 RBL2Q08999 1139 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 GRB10Q13322 594 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 PGM5Q15124 567 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 AAK1Q2M2I8 961 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 HSDL1Q3SXM5 330 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 FAM117BQ6P1L5 589 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 MTMR8Q96EF0 704 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 SPATA33Q96N06 139 aa13.56□□□□□ -0.24
GARNL3-210ENST00000453030 ATG2AQ2TAZ0 1938 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 PALM3A6NDB9 673 aaPredicted RBP13.55□□□□□ -0.24
GARNL3-210ENST00000453030 HAS3O00219 553 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 CXCL10P02778 98 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 BMP1P13497 986 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
GARNL3-210ENST00000453030 POU3F3P20264 500 aaPredicted RBP13.55□□□□□ -0.24
GARNL3-210ENST00000453030 CCND2P30279 289 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 GHRHRQ02643 423 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 TRDNQ13061 729 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 PTK7Q13308 1070 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 GRM4Q14833 912 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 SLC35G1Q2M3R5 365 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 CELF3Q5SZQ8 465 aaKnown RBP13.55□□□□□ -0.24
GARNL3-210ENST00000453030 ZNF618Q5T7W0 954 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 STOX1Q6ZVD7 989 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 FCHSD1Q86WN1 690 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
GARNL3-210ENST00000453030 PIGSQ96S52 555 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 SENP2Q9HC62 589 aa13.55□□□□□ -0.24
GARNL3-210ENST00000453030 GCOM1H8Y6P7 765 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-210ENST00000453030 LPXNO60711 386 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 GJB5O95377 273 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 PARNO95453 639 aaKnown RBP13.54□□□□□ -0.24
GARNL3-210ENST00000453030 CYP21A2P08686 494 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 POLR2MP0CAP2 368 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 HOXD8P13378 290 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-210ENST00000453030 PDE4AP27815 886 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 SP2Q02086 613 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 HIC1Q14526 733 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 MBTPS1Q14703 1052 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 TRIM71Q2Q1W2 868 aaKnown RBP13.54□□□□□ -0.24
GARNL3-210ENST00000453030 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 MYSM1Q5VVJ2 828 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 TRAF7Q6Q0C0 670 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 PIBF1Q8WXW3 757 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 TAF6LQ9Y6J9 622 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 RALGAPA2Q2PPJ7 1873 aa13.54□□□□□ -0.24
GARNL3-210ENST00000453030 ABHD14A-ACY1A0A1B0GW23 586 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 ERICH2A1L162 156 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 IFIT3O14879 490 aaKnown RBP13.53□□□□□ -0.24
GARNL3-210ENST00000453030 CYTH3O43739 400 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 THPOP40225 353 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 PTH1RQ03431 593 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 IKBKEQ14164 716 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 KCNV1Q6PIU1 500 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
GARNL3-210ENST00000453030 VSIG10LQ86VR7 867 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 MAP3K20Q9NYL2 800 aaKnown RBP13.53□□□□□ -0.24
GARNL3-210ENST00000453030 MYO7AQ13402 2215 aa13.53□□□□□ -0.24
GARNL3-210ENST00000453030 LOXHD1Q8IVV2 1947 aa13.52□□□□□ -0.24
GARNL3-210ENST00000453030 LINC01553A4QN01 128 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 NOP56O00567 594 aaKnown RBP13.52□□□□□ -0.25
GARNL3-210ENST00000453030 PPFIA4O75335 1185 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 LGR5O75473 907 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 LGALS2P05162 132 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 CTSHP09668 335 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 WTAPQ15007 396 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.52□□□□□ -0.25
GARNL3-210ENST00000453030 MYOCDQ8IZQ8 938 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 HLA-CQ95604 372 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.25
GARNL3-210ENST00000453030 RAD9AQ99638 391 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 RIOX1Q9H6W3 641 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 COG5Q9UP83 839 aa13.52□□□□□ -0.25
GARNL3-210ENST00000453030 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-210ENST00000453030 EMSYQ7Z589 1322 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 PNMA6FA0A0J9YX94 578 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 C17orf102A2RUQ5 167 aa13.51□□□□□ -0.25
GARNL3-210ENST00000453030 EFCAB14O75071 495 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms