RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 FOXR2Q6PJQ5 311 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 SEC63Q9UGP8 760 aaKnown RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 REXO2Q9Y3B8 237 aaKnown RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 CNMDO75829 334 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 ICAM1P05362 532 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 CYP11B2P19099 503 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 FXR1P51114 621 aaKnown RBP eCLIP7.42□□□□□ -1.22
USP46-202ENST00000451218 WDR59Q6PJI9 974 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 ZNF710Q8N1W2 664 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 CCDC12Q8WUD4 166 aaPredicted RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 ZKSCAN4Q969J2 545 aaPredicted RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 BORCS6Q96GS4 357 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 AMNQ9BXJ7 453 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 FHDC1Q9C0D6 1143 aaPredicted RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 CUEDC2Q9H467 287 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 CTNND2Q9UQB3 1225 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 BPTFQ12830 3046 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 POTEB3A0JP26 581 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 EPHB6O15197 1021 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 CTNND1O60716 968 aaKnown RBP7.42□□□□□ -1.22
USP46-202ENST00000451218 MAPK7Q13164 816 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 TCP11X2Q5H9J9 407 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 POTEBQ6S5H4 581 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 TRIM5Q9C035 493 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 IKZF4Q9H2S9 585 aa7.42□□□□□ -1.22
USP46-202ENST00000451218 MEIS1O00470 390 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 TXKP42681 527 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 FSTL1Q12841 308 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 USH1GQ495M9 461 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 DAW1Q8N136 415 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 GPC2Q8N158 579 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 UIMC1Q96RL1 719 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 MAGEF1Q9HAY2 307 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 MYH9P35579 1960 aaKnown RBP7.41□□□□□ -1.22
USP46-202ENST00000451218 PDCD11Q14690 1871 aaKnown RBP7.41□□□□□ -1.22
USP46-202ENST00000451218 TBX3O15119 743 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 PEX10O60683 326 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 ARP10275 920 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 GCFC2P16383 781 aaKnown RBP7.41□□□□□ -1.22
USP46-202ENST00000451218 ERVK-24P63145 666 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 SH3D19Q5HYK7 790 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 FBXO11Q86XK2 927 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 TEX2Q8IWB9 1127 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 LRRN4CLQ8ND94 238 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 CEP89Q96ST8 783 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 PITPNM2Q9BZ72 1349 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 E9PMD0 336 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 SLITRK3O94933 977 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 KLK7P49862 253 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 MTF1Q14872 753 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 CCDC96Q2M329 555 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 ZNF341Q9BYN7 854 aa7.41□□□□□ -1.22
USP46-202ENST00000451218 ATP2A1O14983 1001 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 PPP1R37O75864 691 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 STX17P56962 302 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 ANGEL2Q5VTE6 544 aaKnown RBP7.4□□□□□ -1.22
USP46-202ENST00000451218 LDHDQ86WU2 507 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 CCAR2Q8N163 923 aaKnown RBP7.4□□□□□ -1.22
USP46-202ENST00000451218 BCS1LQ9Y276 419 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 SIK3Q9Y2K2 1263 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 UBIAD1Q9Y5Z9 338 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 POTEFA5A3E0 1075 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 CTIFO43310 598 aaKnown RBP7.4□□□□□ -1.22
USP46-202ENST00000451218 POTEIP0CG38 1075 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 STAT6P42226 847 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 TNNI2P48788 182 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 MTMR2Q13614 643 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 GIT2Q14161 759 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 POTEGQ6S5H5 508 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 NELFBQ8WX92 580 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 VEZTQ9HBM0 779 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 FEM1BQ9UK73 627 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 PPP1R9AQ9ULJ8 1098 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 VWA5AO00534 786 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 MARSP56192 900 aaKnown RBP7.4□□□□□ -1.22
USP46-202ENST00000451218 RAD9BQ6WBX8 426 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 TOGARAM2Q6ZUX3 1019 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 TMEM174Q8WUU8 243 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 SCFD1Q8WVM8 642 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 DDX12PQ92771 950 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 KIFC2Q96AC6 838 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 L3MBTL3Q96JM7 780 aaPredicted RBP7.4□□□□□ -1.22
USP46-202ENST00000451218 STK17AQ9UEE5 414 aa7.4□□□□□ -1.22
USP46-202ENST00000451218 PFASO15067 1338 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 RPA1P27694 616 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 GJA5P36382 358 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 ZNF131P52739 623 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 TNIP1Q15025 636 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 PPP4R3BQ5MIZ7 849 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 UNC13DQ70J99 1090 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 SCYL3Q8IZE3 742 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 LARP4BQ92615 738 aaKnown RBP7.4□□□□□ -1.23
USP46-202ENST00000451218 RUSC1Q9BVN2 902 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 MAPK8IP1Q9UQF2 711 aa7.4□□□□□ -1.23
USP46-202ENST00000451218 WDR46O15213 610 aaKnown RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 SLC26A4O43511 780 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 NOL4O94818 638 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 ASNSP08243 561 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 SF3B2Q13435 895 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms