RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 NTRK1P04629 796 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 HOXA5P20719 270 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 PMLP29590 882 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 GFRA1P56159 465 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 HTRA3P83110 453 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 SLC10A6Q3KNW5 377 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 FAM9AQ8IZU1 332 aaPredicted RBP6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 Q8N1Y9 231 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 NLGN1Q8N2Q7 840 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 TP53I13Q8NBR0 393 aaPredicted RBP6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 USP33Q8TEY7 942 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 CPA5Q8WXQ8 436 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 C1orf159Q96HA4 380 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 C20orf173Q96LM9 149 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 ZCCHC4Q9H5U6 513 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 MARCH2Q9P0N8 246 aa6.61□□□□□ -1.35
GTF3C3-207ENST00000451088 NCOA1Q15788 1441 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 FFAR3O14843 346 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 SNRPB2P08579 225 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 MC3RP41968 323 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 KCNAB2Q13303 367 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 SF1Q15637 639 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 DDR2Q16832 855 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 VMACQ2NL98 169 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 VWA3BQ502W6 1294 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 ANKS3Q6ZW76 656 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 B3GNT8Q7Z7M8 397 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 FNIP1Q8TF40 1166 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 BCAS3Q9H6U6 928 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 TIMM13Q9Y5L4 95 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 ARHGEF12Q9NZN5 1544 aa6.6□□□□□ -1.35
GTF3C3-207ENST00000451088 E9PSI1 815 aa6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 ECI1P42126 302 aa6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 GTF2A2P52657 109 aa6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 DCP2Q8IU60 420 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 RIOX2Q8IUF8 465 aa6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 TEX2Q8IWB9 1127 aa6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 DIO2Q92813 273 aa6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 XYLT2Q9H1B5 865 aa6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 LUC7LQ9NQ29 371 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 X6R8D5 127 aa6.59□□□□□ -1.35
GTF3C3-207ENST00000451088 ATP10AO60312 1499 aa6.59□□□□□ -1.36
GTF3C3-207ENST00000451088 MAGI2Q86UL8 1455 aa6.59□□□□□ -1.36
GTF3C3-207ENST00000451088 RAPGEF2Q9Y4G8 1499 aa6.59□□□□□ -1.36
GTF3C3-207ENST00000451088 A0A1W2PQU0 124 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 C22orf46C9J442 243 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 MEFVO15553 781 aaPredicted RBP6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 SLC6A11P48066 632 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 RPL11P62913 178 aaKnown RBP6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 CACNB2Q08289 660 aaPredicted RBP6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 PRSS53Q2L4Q9 553 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 SLC35F1Q5T1Q4 408 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 MROH9Q5TGP6 573 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 DENND5AQ6IQ26 1287 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 SAPCD2Q86UD0 394 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 NLRP10Q86W26 655 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 TMEM145Q8NBT3 493 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 FAN1Q9Y2M0 1017 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 SIT1Q9Y3P8 196 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 R3HCC1Q9Y3T6 440 aaKnown RBP6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 NPFFR2Q9Y5X5 522 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 PMF1-BGLAPU3KQ54 211 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 TRAPPC8Q9Y2L5 1435 aa6.58□□□□□ -1.36
GTF3C3-207ENST00000451088 ZFYVE16Q7Z3T8 1539 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 A0A0G2JLL6 359 aaPredicted RBP6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 AGRPO00253 132 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 SGSM2O43147 1006 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 GRIA2P42262 883 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 CTSWP56202 376 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 PPP2R2AP63151 447 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 DLX2Q07687 328 aaPredicted RBP6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 MIB1Q86YT6 1006 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 PPIL6Q8IXY8 311 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 SP8Q8IXZ3 490 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 RCBTB1Q8NDN9 531 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 AP5M1Q9H0R1 490 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 ST7Q9NRC1 585 aa6.57□□□□□ -1.36
GTF3C3-207ENST00000451088 EFCAB5A4FU69 1503 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 SH3D21A4FU49 640 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 SASH1O94885 1247 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 FPR2P25090 351 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 LTBRP36941 435 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 BCL6P41182 706 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 KCNJ6P48051 423 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 ZC3H6P61129 1189 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 MAP4K2Q12851 820 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 RAB33AQ14088 237 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 CEP68Q76N32 757 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 SEC14L1Q92503 715 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 SGSM3Q96HU1 749 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 BTG4Q9NY30 223 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 PODXL2Q9NZ53 605 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 RTEL1Q9NZ71 1219 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 FBXL7Q9UJT9 491 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 CAMSAP1Q5T5Y3 1602 aa6.56□□□□□ -1.36
GTF3C3-207ENST00000451088 C3P01024 1663 aa6.55□□□□□ -1.36
GTF3C3-207ENST00000451088 HECW1Q76N89 1606 aa6.55□□□□□ -1.36
GTF3C3-207ENST00000451088 PLEKHD1A6NEE1 506 aa6.55□□□□□ -1.36
GTF3C3-207ENST00000451088 OTOL1A6NHN0 477 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms