RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 LY6KQ17RY6 165 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 OR6J1Q8NGC5 347 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 COPS5Q92905 334 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 SENP7Q9BQF6 1050 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 MAFGO15525 162 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 JAK2O60674 1132 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 CABYRO75952 493 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 XBP1P17861 261 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 ITGB5P18084 799 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 UBA1P22314 1058 aaKnown RBP16.41■□□□□ 0.22
COL3A1-203ENST00000450867 NLRP5P59047 1200 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 ARHGAP4P98171 946 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 BEX3Q00994 111 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 SP2Q02086 613 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 MYSM1Q5VVJ2 828 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 JAKMIP3Q5VZ66 844 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 NIPA1Q7RTP0 329 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 NLRX1Q86UT6 975 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 CDHR1Q96JP9 859 aa16.41■□□□□ 0.22
COL3A1-203ENST00000450867 SENP6Q9GZR1 1112 aaPredicted RBP16.41■□□□□ 0.22
COL3A1-203ENST00000450867 ZEB2O60315 1214 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 LAMC2Q13753 1193 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 CEP55Q53EZ4 464 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 BRDTQ58F21 947 aaPredicted RBP16.4■□□□□ 0.22
COL3A1-203ENST00000450867 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
COL3A1-203ENST00000450867 SLC39A5Q6ZMH5 540 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 CCDC83Q8IWF9 413 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 PPTC7Q8NI37 304 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 ZFP91Q96JP5 570 aaPredicted RBP16.4■□□□□ 0.22
COL3A1-203ENST00000450867 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 MXRA8Q9BRK3 442 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 ALG1Q9BT22 464 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 JADE2Q9NQC1 790 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 LTBP2Q14767 1821 aa16.4■□□□□ 0.22
COL3A1-203ENST00000450867 MEIS1O00470 390 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 KPNA6O60684 536 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 GGPS1O95749 300 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 CIITAP33076 1130 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 HMGN5P82970 282 aaKnown RBP16.39■□□□□ 0.21
COL3A1-203ENST00000450867 PURAQ00577 322 aaKnown RBP16.39■□□□□ 0.21
COL3A1-203ENST00000450867 NEDD9Q14511 834 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 SLC43A3Q8NBI5 491 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 RASGRP4Q8TDF6 673 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 FERMT2Q96AC1 680 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 TMX3Q96JJ7 454 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 GLT1D1Q96MS3 346 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 SEZ6LQ9BYH1 1024 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 RTEL1Q9NZ71 1219 aa16.39■□□□□ 0.21
COL3A1-203ENST00000450867 IGLV3-22A0A075B6J6 115 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 EDIL3O43854 480 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
COL3A1-203ENST00000450867 MMP3P08254 477 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 KCNA2P16389 499 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 CDK7P50613 346 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 METTL7BQ6UX53 244 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
COL3A1-203ENST00000450867 GIMAP8Q8ND71 665 aaPredicted RBP16.38■□□□□ 0.21
COL3A1-203ENST00000450867 AFG1LQ8WV93 481 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 STARD7Q9NQZ5 370 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 KCNJ14Q9UNX9 436 aa16.38■□□□□ 0.21
COL3A1-203ENST00000450867 A0A0U1RQG5 324 aaPredicted RBP16.37■□□□□ 0.21
COL3A1-203ENST00000450867 DTNBO60941 627 aa16.37■□□□□ 0.21
COL3A1-203ENST00000450867 USP11P51784 963 aa16.37■□□□□ 0.21
COL3A1-203ENST00000450867 MTMR1Q13613 665 aa16.37■□□□□ 0.21
COL3A1-203ENST00000450867 CXCL17Q6UXB2 119 aa16.37■□□□□ 0.21
COL3A1-203ENST00000450867 ANKRD33Q7Z3H0 272 aa16.37■□□□□ 0.21
COL3A1-203ENST00000450867 TOX2Q96NM4 488 aa16.37■□□□□ 0.21
COL3A1-203ENST00000450867 KCNH7Q9NS40 1196 aa16.37■□□□□ 0.21
COL3A1-203ENST00000450867 GJB4Q9NTQ9 266 aa16.37■□□□□ 0.21
COL3A1-203ENST00000450867 FAM86B1E9PN63 330 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 EVI5O60447 810 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 ATP9AO75110 1047 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 PPFIA4O75335 1185 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 MMP1P03956 469 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 FAM86B2P0C5J1 330 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 RTP1P59025 263 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 HSDL1Q3SXM5 330 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 MOXD1Q6UVY6 613 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 KRT25Q7Z3Z0 450 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 CYP2W1Q8TAV3 490 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 TNFRSF25Q93038 417 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 LENG9Q96B70 501 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 MTG1Q9BT17 334 aaPredicted RBP16.36■□□□□ 0.21
COL3A1-203ENST00000450867 BCAS3Q9H6U6 928 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 NR2E3Q9Y5X4 410 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 MYH9P35579 1960 aaKnown RBP16.36■□□□□ 0.21
COL3A1-203ENST00000450867 GRIN2DO15399 1336 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 NFASCO94856 1347 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 KAT6AQ92794 2004 aa16.36■□□□□ 0.21
COL3A1-203ENST00000450867 TRIP12Q14669 1992 aaPredicted RBP16.35■□□□□ 0.21
COL3A1-203ENST00000450867 CYP3A7-CYP3A51PA0A087WV96 503 aa16.35■□□□□ 0.21
COL3A1-203ENST00000450867 ARVCFO00192 962 aa16.35■□□□□ 0.21
COL3A1-203ENST00000450867 CYP3A7P24462 503 aa16.35■□□□□ 0.21
COL3A1-203ENST00000450867 ATN1P54259 1190 aaPredicted RBP16.35■□□□□ 0.21
COL3A1-203ENST00000450867 SETQ01105 290 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms