RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 PANK4Q9NVE7 773 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 ADAMTSL1Q8N6G6 1762 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 NPHP3-ACAD11A0A0J9YXS1 232 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 ANO9A1A5B4 782 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 LMAN1P49257 510 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 CACNB3P54284 484 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 CKAP4Q07065 602 aaKnown RBP24.57■■□□□ 1.52
TTC3-210ENST00000450533 TSGA10Q9BZW7 698 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 KIAA1024Q9UPX6 916 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 FAN1Q9Y2M0 1017 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 ATP6V0A2Q9Y487 856 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 TRAF5O00463 557 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 USO1O60763 962 aaKnown RBP24.57■■□□□ 1.52
TTC3-210ENST00000450533 C2orf54Q08AI8 447 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 GPATCH4Q5T3I0 446 aaKnown RBP24.57■■□□□ 1.52
TTC3-210ENST00000450533 NELFCDQ8IXH7 590 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 ANKRD13CQ8N6S4 541 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 BAP1Q92560 729 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 LRRC27Q9C0I9 530 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 SH2D4AQ9H788 454 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 KANSL2Q9H9L4 492 aa24.57■■□□□ 1.52
TTC3-210ENST00000450533 PSMD2Q13200 908 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 FAM26FQ5R3K3 315 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 CACNA2D4Q7Z3S7 1137 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 GSPT2Q8IYD1 628 aaKnown RBP24.56■■□□□ 1.52
TTC3-210ENST00000450533 IQCDQ96DY2 449 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 PSMB7Q99436 277 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 NLRC4Q9NPP4 1024 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 LTBP1Q14766 1721 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 TNNT3P45378 269 aaPredicted RBP24.56■■□□□ 1.52
TTC3-210ENST00000450533 MEX3CQ5U5Q3 659 aaKnown RBP24.56■■□□□ 1.52
TTC3-210ENST00000450533 TAF3Q5VWG9 929 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 TXLNBQ8N3L3 684 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 PCDHAC2Q9Y5I4 1007 aa24.56■■□□□ 1.52
TTC3-210ENST00000450533 POTEB3A0JP26 581 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 POTECB2RU33 542 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 HLA-DOAP06340 250 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 KCNMA1Q12791 1236 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 TCP10Q12799 353 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 CCDC40Q4G0X9 1142 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 APOBEC3HQ6NTF7 200 aaKnown RBP24.55■■□□□ 1.52
TTC3-210ENST00000450533 POTEBQ6S5H4 581 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 TRIM58Q8NG06 486 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 ABCB11O95342 1321 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 KLRG2A4D1S0 409 aaPredicted RBP24.55■■□□□ 1.52
TTC3-210ENST00000450533 STAT3P40763 770 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 GFPT1Q06210 699 aaPredicted RBP24.55■■□□□ 1.52
TTC3-210ENST00000450533 SUGT1Q9Y2Z0 365 aa24.55■■□□□ 1.52
TTC3-210ENST00000450533 TACC1O75410 805 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 QRICH1Q2TAL8 776 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 ZCWPW2Q504Y3 356 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 COG1Q8WTW3 980 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 EXOC4Q96A65 974 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 RPGRIP1Q96KN7 1286 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 DNAJC18Q9H819 358 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 KCNQ5Q9NR82 932 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 SNX12Q9UMY4 172 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 JRKLQ9Y4A0 524 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 COL4A3BPQ9Y5P4 624 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 MYH10P35580 1976 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 FKBP3Q00688 224 aaKnown RBP24.54■■□□□ 1.52
TTC3-210ENST00000450533 APBA1Q02410 837 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 CRACR2AQ9BSW2 395 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 CALCOCO1Q9P1Z2 691 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 SALL4Q9UJQ4 1053 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 ATF5Q9Y2D1 282 aaPredicted RBP24.54■■□□□ 1.52
TTC3-210ENST00000450533 PCDHA1Q9Y5I3 950 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 MYH4Q9Y623 1939 aa24.54■■□□□ 1.52
TTC3-210ENST00000450533 G3V3G9 751 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 MYBL2P10244 700 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 CXCR5P32302 372 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 DCAF8Q5TAQ9 597 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 PDXDC1Q6P996 788 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 MSL3Q8N5Y2 521 aaKnown RBP24.53■■□□□ 1.52
TTC3-210ENST00000450533 TEKT1Q969V4 418 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 MTMR8Q96EF0 704 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 BMP2KQ9NSY1 1161 aaPredicted RBP24.53■■□□□ 1.52
TTC3-210ENST00000450533 PLA2G4BP0C869 781 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 GCFC2P16383 781 aaKnown RBP24.53■■□□□ 1.52
TTC3-210ENST00000450533 MAGEA1P43355 309 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 SNAP25P60880 206 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 TDRD12Q587J7 1177 aaKnown RBP24.53■■□□□ 1.52
TTC3-210ENST00000450533 HSP90B2PQ58FF3 399 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 CREG2Q8IUH2 290 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 ZHX3Q9H4I2 956 aa24.53■■□□□ 1.52
TTC3-210ENST00000450533 NFRKBQ6P4R8 1299 aa24.52■■□□□ 1.52
TTC3-210ENST00000450533 GPBP1Q86WP2 473 aa24.52■■□□□ 1.52
TTC3-210ENST00000450533 PROM2Q8N271 834 aa24.52■■□□□ 1.52
TTC3-210ENST00000450533 SMARCAL1Q9NZC9 954 aa24.52■■□□□ 1.52
TTC3-210ENST00000450533 LCA5LO95447 670 aa24.52■■□□□ 1.52
TTC3-210ENST00000450533 SLC1A4P43007 532 aa24.52■■□□□ 1.52
TTC3-210ENST00000450533 MRPS25P82663 173 aaKnown RBP24.52■■□□□ 1.52
TTC3-210ENST00000450533 RASSF7Q02833 373 aa24.52■■□□□ 1.52
TTC3-210ENST00000450533 HERC4Q5GLZ8 1057 aaPredicted RBP24.52■■□□□ 1.52
TTC3-210ENST00000450533 NT5C3AQ9H0P0 336 aa24.52■■□□□ 1.52
TTC3-210ENST00000450533 LRRC37AA6NMS7 1700 aa24.51■■□□□ 1.51
TTC3-210ENST00000450533 MYO3BQ8WXR4 1341 aa24.51■■□□□ 1.51
TTC3-210ENST00000450533 NCK2O43639 380 aa24.51■■□□□ 1.51
TTC3-210ENST00000450533 EEF2P13639 858 aaKnown RBP24.51■■□□□ 1.51
TTC3-210ENST00000450533 TMC4Q7Z404 712 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms