RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 MLXIPQ9HAP2 919 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 TRMT13Q9NUP7 481 aaKnown RBP18.45■□□□□ 0.54
SGCE-208ENST00000450385 NOD1Q9Y239 953 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 HAS3O00219 553 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 PLEKHA8P1O95397 391 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 RBL2Q08999 1139 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 NLRX1Q86UT6 975 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 C7orf31Q8N865 590 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 AFAP1L1Q8TED9 768 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 KAT2BQ92831 832 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 SPATA33Q96N06 139 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 GTF2IRD1Q9UHL9 959 aa18.44■□□□□ 0.54
SGCE-208ENST00000450385 GGPS1O95749 300 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 ACTN1P12814 892 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 PSMA5P28066 241 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 HSPA4P34932 840 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 MRPS9P82933 396 aaKnown RBP18.43■□□□□ 0.54
SGCE-208ENST00000450385 RAB30Q15771 203 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 PTGISQ16647 500 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 PPP1R18Q6NYC8 613 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 METTL7BQ6UX53 244 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 RASEFQ8IZ41 740 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 WNT8AQ9H1J5 351 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 KAT6AQ92794 2004 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 CDH23Q9H251 3354 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 A0A0C4DFX4 3053 aa18.43■□□□□ 0.54
SGCE-208ENST00000450385 FOSP01100 380 aaPredicted RBP18.42■□□□□ 0.54
SGCE-208ENST00000450385 IQCF3P0C7M6 154 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 UBA1P22314 1058 aaKnown RBP18.42■□□□□ 0.54
SGCE-208ENST00000450385 PSEN2P49810 448 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 CCL23P55773 120 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 FGD1P98174 961 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 MFSD10Q14728 455 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 RTN1Q16799 776 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 MCTP2Q6DN12 878 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 IL31RAQ8NI17 732 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 GPRASP2Q96D09 838 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
SGCE-208ENST00000450385 SPDYE3A6NKU9 549 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 ACRP10323 421 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 CYP2C9P11712 490 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 DNAJB2P25686 324 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 SP2Q02086 613 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 PTK7Q13308 1070 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 KIAA0753Q2KHM9 967 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 ADCK5Q3MIX3 580 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 HSDL1Q3SXM5 330 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 USP17L6PQ6QN14 398 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 PHOSPHO2Q8TCD6 241 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 GUCD1Q96NT3 240 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 MSRAQ9UJ68 235 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 MYO9BQ13459 2157 aa18.41■□□□□ 0.54
SGCE-208ENST00000450385 NOP56O00567 594 aaKnown RBP18.4■□□□□ 0.54
SGCE-208ENST00000450385 BAIAP3O94812 1187 aa18.4■□□□□ 0.54
SGCE-208ENST00000450385 GNAT1P11488 350 aa18.4■□□□□ 0.54
SGCE-208ENST00000450385 GDF6Q6KF10 455 aaPredicted RBP18.4■□□□□ 0.54
SGCE-208ENST00000450385 BLOC1S2Q6QNY1 142 aa18.4■□□□□ 0.54
SGCE-208ENST00000450385 TIFAQ96CG3 184 aa18.4■□□□□ 0.54
SGCE-208ENST00000450385 AGXT2Q9BYV1 514 aa18.4■□□□□ 0.54
SGCE-208ENST00000450385 RIC8AQ9NPQ8 531 aa18.4■□□□□ 0.54
SGCE-208ENST00000450385 SLC4A7Q9Y6M7 1214 aa18.4■□□□□ 0.54
SGCE-208ENST00000450385 UMODL1Q5DID0 1318 aa18.4■□□□□ 0.54
SGCE-208ENST00000450385 H3BRB1 525 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
SGCE-208ENST00000450385 SELPP16109 830 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 RXRAP19793 462 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 FUT2Q10981 343 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 COL9A3Q14050 684 aaPredicted RBP18.39■□□□□ 0.53
SGCE-208ENST00000450385 SKAP1Q86WV1 359 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 CCDC82Q8N4S0 544 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 SLC17A8Q8NDX2 589 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 CDX2Q99626 313 aaPredicted RBP18.39■□□□□ 0.53
SGCE-208ENST00000450385 C16orf70Q9BSU1 422 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 TUT1Q9H6E5 874 aaKnown RBP18.39■□□□□ 0.53
SGCE-208ENST00000450385 HDAC6Q9UBN7 1215 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 TANC1Q9C0D5 1861 aa18.39■□□□□ 0.53
SGCE-208ENST00000450385 KLF18A0A0U1RQI7 1052 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 EFCAB14O75071 495 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 CAND2O75155 1236 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 OTOP2Q7RTS6 562 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 CMTR1Q8N1G2 835 aaKnown RBP18.38■□□□□ 0.53
SGCE-208ENST00000450385 CCDC12Q8WUD4 166 aaPredicted RBP18.38■□□□□ 0.53
SGCE-208ENST00000450385 SCLYQ96I15 445 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 TTYH1Q9H313 450 aaPredicted RBP18.38■□□□□ 0.53
SGCE-208ENST00000450385 ZNF576Q9H609 170 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 BARHL2Q9NY43 387 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 ZNF215Q9UL58 517 aaPredicted RBP18.38■□□□□ 0.53
SGCE-208ENST00000450385 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 SNX14Q9Y5W7 946 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 V9GY48 417 aaPredicted RBP18.38■□□□□ 0.53
SGCE-208ENST00000450385 CNTNAP5Q8WYK1 1306 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 NID2Q14112 1375 aa18.38■□□□□ 0.53
SGCE-208ENST00000450385 SCN5AQ14524 2016 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 GOLGA8AA7E2F4 631 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 GOLGA8BA8MQT2 603 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 HOXC8P31273 242 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 METAP2P50579 478 aaKnown RBP eCLIP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms